PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
BceiScaffold22270191130 Steroid CYP90D1 low borderline
BceiScaffold2300204460 Steroid CYP90D1 low borderline
BceiScaffold2830265260 Steroid CYP90D1 medium borderline
BceiScaffold2850268180 Steroid CYP90D1 medium borderline
BceiScaffold2850268190 Steroid CYP90D1 medium borderline
BceiScaffold30278030 Steroid CYP90D1 medium borderline
BceiScaffold3030285370 Steroid CYP90D1 low borderline
BceiScaffold3200291050 Steroid CYP90D1 low borderline
BceiScaffold3200291070 Steroid CYP90D1 low borderline
BceiScaffold3200291090 Steroid CYP90D1 low borderline
BceiScaffold3240295620 Steroid CYP90D1 low borderline
BceiScaffold360308650 Steroid CYP90D1 low borderline
BceiScaffold3920329620 Steroid CYP90D1 medium borderline
BceiScaffold400342980 Steroid CYP90D1 medium borderline
BceiScaffold40334800 Steroid CYP90D1 low borderline
BceiScaffold40334830 Steroid CYP90D1 low borderline
BceiScaffold4050347480 Steroid CYP90D1 low borderline
BceiScaffold480385320 Steroid CYP90D1 low borderline
BceiScaffold480385330 Steroid CYP90D1 low borderline
BceiScaffold4980395590 Steroid CYP90D1 low borderline
BceiScaffold540412420 Steroid CYP90D1 low borderline
BceiScaffold5660418740 Steroid CYP90D1 low borderline
BceiScaffold590429450 Steroid CYP90D1 low borderline
BceiScaffold5980430780 Steroid CYP90D1 medium borderline
BceiScaffold600434840 Steroid CYP90D1 low borderline
BceiScaffold600435470 Steroid CYP90D1 medium borderline
BceiScaffold600435970 Steroid CYP90D1 medium borderline
BceiScaffold650451950 Steroid CYP90D1 low borderline
BceiScaffold700462880 Steroid CYP90D1 low borderline
BceiScaffold710463750 Steroid CYP90D1 low borderline
BceiScaffold740476960 Steroid CYP90D1 low borderline
BceiScaffold7590484540 Steroid CYP90D1 low borderline
BceiScaffold7590484550 Steroid CYP90D1 low borderline
BceiScaffold80497170 Steroid CYP90D1 low borderline
BceiScaffold80502660 Steroid CYP90D1 medium borderline
BceiScaffold810504370 Steroid CYP90D1 medium borderline
BceiScaffold820505530 Steroid CYP90D1 medium borderline
BceiScaffold1320075110 Steroid DET2 low borderline
BceiScaffold4440369940 Steroid DET2 low borderline
BceiScaffold790493330 Steroid DET2 medium pass
BceiScaffold790493350 Steroid DET2 medium pass
BceiScaffold1360079630 Steroid DWF1 medium pass
BceiScaffold480384660 Steroid DWF1 medium pass
BceiScaffold1090030020 Steroid DWF4/CYP90B1 low borderline
BceiScaffold110031840 Steroid DWF4/CYP90B1 low borderline
BceiScaffold1150048020 Steroid DWF4/CYP90B1 low borderline
BceiScaffold1170054100 Steroid DWF4/CYP90B1 low borderline
BceiScaffold11890055110 Steroid DWF4/CYP90B1 medium borderline
BceiScaffold1190055270 Steroid DWF4/CYP90B1 low borderline
BceiScaffold1250060880 Steroid DWF4/CYP90B1 low borderline