PlantSME Plant secondary metabolism enzyme database

Fragaria mandshurica (fragaria_mandshurica)

Imported from atlas release summary for Fragaria mandshurica.

1550
Candidate Protein Records
1321
Pathway-Level Records
3001
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 18 BAHD (153) View species results
Alkaloid pathway 304 22 NMT (45) View species results
Phenylpropanoid pathway 284 11 POD (104) View species results
Flavonoid pathway 165 11 UFGT (101) View species results
Rosmarinic acid pathway 96 7 C4H (34) View species results
Steroid pathway 85 13 CAS (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 246 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
fragaria_mandshurica_evm.model.chr3.259 Phenylpropanoid CAD low borderline
fragaria_mandshurica_evm.model.chr3.2872 Phenylpropanoid CAD low borderline
fragaria_mandshurica_evm.model.chr3.2933 Phenylpropanoid CAD low borderline
fragaria_mandshurica_evm.model.chr3.2935 Phenylpropanoid CAD low borderline
fragaria_mandshurica_evm.model.chr3.2945 Phenylpropanoid CAD low borderline
fragaria_mandshurica_evm.model.chr3.2960 Phenylpropanoid CAD medium borderline
fragaria_mandshurica_evm.model.chr3.3015 Phenylpropanoid CAD low borderline
fragaria_mandshurica_evm.model.chr3.3696 Phenylpropanoid CAD medium pass
fragaria_mandshurica_evm.model.chr4.2859 Phenylpropanoid CAD low borderline
fragaria_mandshurica_evm.model.chr5.2417 Phenylpropanoid CAD low borderline
fragaria_mandshurica_evm.model.chr5.903 Phenylpropanoid CAD medium pass
fragaria_mandshurica_evm.model.chr5.939 Phenylpropanoid CAD low borderline
fragaria_mandshurica_evm.model.chr6.1121 Phenylpropanoid CAD low borderline
fragaria_mandshurica_evm.model.chr6.2020 Phenylpropanoid CAD medium pass
fragaria_mandshurica_evm.model.chr6.2040 Phenylpropanoid CAD low borderline
fragaria_mandshurica_evm.model.chr6.3611 Phenylpropanoid CAD medium pass
fragaria_mandshurica_evm.model.chr6.3612 Phenylpropanoid CAD medium pass
fragaria_mandshurica_evm.model.chr6.3613_evm.model.chr6.3614 Phenylpropanoid CAD medium pass
fragaria_mandshurica_evm.model.chr6.3868 Phenylpropanoid CAD low borderline
fragaria_mandshurica_evm.model.chr6.3870 Phenylpropanoid CAD low borderline
fragaria_mandshurica_evm.model.chr6.4440 Phenylpropanoid CAD low borderline
fragaria_mandshurica_evm.model.chr6.4441 Phenylpropanoid CAD low borderline
fragaria_mandshurica_evm.model.chr6.4507 Phenylpropanoid CAD low borderline
fragaria_mandshurica_evm.model.chr7.169 Phenylpropanoid CAD low borderline
fragaria_mandshurica_evm.model.chr7.475 Phenylpropanoid CAD medium pass
fragaria_mandshurica_evm.model.chr7.851 Phenylpropanoid CAD medium borderline
fragaria_mandshurica_evm.model.chr3.3251 Phenylpropanoid CCR medium borderline
fragaria_mandshurica_evm.model.chr4.1454 Phenylpropanoid CCR low borderline
fragaria_mandshurica_evm.model.chr4.1501 Phenylpropanoid CCR low borderline
fragaria_mandshurica_evm.model.chr5.105 Phenylpropanoid CCR medium borderline
fragaria_mandshurica_evm.model.chr5.2008 Phenylpropanoid CCR medium borderline
fragaria_mandshurica_evm.model.chr5.2687 Phenylpropanoid CCR low borderline
fragaria_mandshurica_evm.model.chr5.3176 Phenylpropanoid CCR medium borderline
fragaria_mandshurica_evm.model.chr5.3177 Phenylpropanoid CCR medium borderline
fragaria_mandshurica_evm.model.chr5.3184 Phenylpropanoid CCR medium borderline
fragaria_mandshurica_evm.model.chr5.3185 Phenylpropanoid CCR medium borderline
fragaria_mandshurica_evm.model.chr5.3297 Phenylpropanoid CCR medium borderline
fragaria_mandshurica_evm.model.chr6.1457 Phenylpropanoid CCR medium borderline
fragaria_mandshurica_evm.model.chr6.4009 Phenylpropanoid CCR medium pass
fragaria_mandshurica_evm.model.chr6.4028 Phenylpropanoid CCR medium pass
fragaria_mandshurica_evm.model.chr6.4451 Phenylpropanoid CCR medium pass
fragaria_mandshurica_evm.model.chr6.4520 Phenylpropanoid CCR medium pass
fragaria_mandshurica_evm.model.chr7.1148 Phenylpropanoid CCR medium pass
fragaria_mandshurica_evm.model.chr7.1149 Phenylpropanoid CCR medium pass
fragaria_mandshurica_evm.model.chr7.850 Phenylpropanoid CCR medium pass
fragaria_mandshurica_evm.model.chr7.852 Phenylpropanoid CCR medium pass
fragaria_mandshurica_evm.model.chr1.1065 Phenylpropanoid CCoAOMT medium pass
fragaria_mandshurica_evm.model.chr1.1067 Phenylpropanoid CCoAOMT medium pass
fragaria_mandshurica_evm.model.chr1.734 Phenylpropanoid CCoAOMT medium pass
fragaria_mandshurica_evm.model.chr1.735 Phenylpropanoid CCoAOMT medium pass