PlantSME Plant secondary metabolism enzyme database

Fragaria mandshurica (fragaria_mandshurica)

Imported from atlas release summary for Fragaria mandshurica.

1321
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 18 BAHD (153) View species results
Alkaloid pathway 304 22 NMT (45) View species results
Phenylpropanoid pathway 284 11 POD (104) View species results
Flavonoid pathway 165 11 UFGT (101) View species results
Rosmarinic acid pathway 96 7 C4H (34) View species results
Steroid pathway 85 13 CAS (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 246 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3'H/CYP75B
Reset
Gene Pathway Family Confidence Status
fragaria_mandshurica_evm.model.chr0.1288 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr0.407 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr0.712 Flavonoid F3'H/CYP75B low borderline
fragaria_mandshurica_evm.model.chr0.864 Flavonoid F3'H/CYP75B low borderline
fragaria_mandshurica_evm.model.chr1.482 Flavonoid F3'H/CYP75B low borderline
fragaria_mandshurica_evm.model.chr1.909 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr2.1265 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr2.1726 Flavonoid F3'H/CYP75B low borderline
fragaria_mandshurica_evm.model.chr2.3016 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr2.3362 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr3.1392_evm.model.chr3.1393 Flavonoid F3'H/CYP75B low borderline
fragaria_mandshurica_evm.model.chr3.2716 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr3.3349 Flavonoid F3'H/CYP75B low borderline
fragaria_mandshurica_evm.model.chr3.3356 Flavonoid F3'H/CYP75B low borderline
fragaria_mandshurica_evm.model.chr4.1455 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr4.1498 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr4.1978 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr4.1979 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr4.2031 Flavonoid F3'H/CYP75B low borderline
fragaria_mandshurica_evm.model.chr4.2295 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr4.2319 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr4.2320 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr4.2323 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr4.2325 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr4.2462 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr4.3092 Flavonoid F3'H/CYP75B low borderline
fragaria_mandshurica_evm.model.chr4.557 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr4.692 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr5.107 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr5.1189 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr5.1224 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr5.1263 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr5.1336 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr5.256 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr5.2990 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr5.2991 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr5.677 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr5.678 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr5.736 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr6.1970 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr6.2256 Flavonoid F3'H/CYP75B low borderline
fragaria_mandshurica_evm.model.chr6.2404 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr6.2858 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr6.4101 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr6.4122 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr6.4692 Flavonoid F3'H/CYP75B low borderline
fragaria_mandshurica_evm.model.chr6.896 Flavonoid F3'H/CYP75B low borderline
fragaria_mandshurica_evm.model.chr6.98 Flavonoid F3'H/CYP75B low borderline
fragaria_mandshurica_evm.model.chr7.1237 Flavonoid F3'H/CYP75B medium borderline
fragaria_mandshurica_evm.model.chr7.1961 Flavonoid F3'H/CYP75B low borderline