PlantSME Plant secondary metabolism enzyme database

Fragaria mandshurica (fragaria_mandshurica)

Imported from atlas release summary for Fragaria mandshurica.

1321
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 18 BAHD (153) View species results
Alkaloid pathway 304 22 NMT (45) View species results
Phenylpropanoid pathway 284 11 POD (104) View species results
Flavonoid pathway 165 11 UFGT (101) View species results
Rosmarinic acid pathway 96 7 C4H (34) View species results
Steroid pathway 85 13 CAS (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 246 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
fragaria_mandshurica_evm.model.chr0.107 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
fragaria_mandshurica_evm.model.chr0.1126 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
fragaria_mandshurica_evm.model.chr0.441 Alkaloid NMT low borderline NMT__00048__sp_Q8W595_SUVR4_ARATH
fragaria_mandshurica_evm.model.chr0.584 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
fragaria_mandshurica_evm.model.chr0.865 Alkaloid NMT medium borderline NMT__00062__sp_Q9SCP7_NAMT1_ARATH
fragaria_mandshurica_evm.model.chr0.867 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
fragaria_mandshurica_evm.model.chr1.1092 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
fragaria_mandshurica_evm.model.chr1.1262 Alkaloid NMT medium pass NMT__00016__sp_F4JNX3_CMKMT_ARATH
fragaria_mandshurica_evm.model.chr1.1723 Alkaloid NMT medium pass NMT__00025__sp_P93831_CLF_ARATH
fragaria_mandshurica_evm.model.chr1.2044 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
fragaria_mandshurica_evm.model.chr1.2498 Alkaloid NMT medium pass NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
fragaria_mandshurica_evm.model.chr1.261 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
fragaria_mandshurica_evm.model.chr1.2735 Alkaloid NMT low borderline NMT__00068__sp_Q9XI84_RBCMT_ARATH
fragaria_mandshurica_evm.model.chr1.375 Alkaloid NMT medium pass NMT__00060__sp_Q9MAT5_ANM10_ARATH
fragaria_mandshurica_evm.model.chr1.480 Alkaloid NMT medium pass NMT__00060__sp_Q9MAT5_ANM10_ARATH
fragaria_mandshurica_evm.model.chr1.6 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
fragaria_mandshurica_evm.model.chr1.746 Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
fragaria_mandshurica_evm.model.chr2.1521 Alkaloid NMT medium pass NMT__00019__sp_O22781_SUVH2_ARATH
fragaria_mandshurica_evm.model.chr2.1522 Alkaloid NMT medium pass NMT__00067__sp_Q9T0G7_SUVH9_ARATH
fragaria_mandshurica_evm.model.chr2.1572 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
fragaria_mandshurica_evm.model.chr2.1946 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
fragaria_mandshurica_evm.model.chr2.2295 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
fragaria_mandshurica_evm.model.chr2.2299 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
fragaria_mandshurica_evm.model.chr2.2326 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
fragaria_mandshurica_evm.model.chr2.2510 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
fragaria_mandshurica_evm.model.chr2.3189 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
fragaria_mandshurica_evm.model.chr2.3361 Alkaloid NMT medium borderline NMT__00058__sp_Q9FZN8_TCS1_CAMSI
fragaria_mandshurica_evm.model.chr2.602 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
fragaria_mandshurica_evm.model.chr3.1119 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
fragaria_mandshurica_evm.model.chr3.1184 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
fragaria_mandshurica_evm.model.chr3.1224 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
fragaria_mandshurica_evm.model.chr3.1417 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
fragaria_mandshurica_evm.model.chr3.1418 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
fragaria_mandshurica_evm.model.chr3.1613 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
fragaria_mandshurica_evm.model.chr3.1614 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
fragaria_mandshurica_evm.model.chr3.1913 Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
fragaria_mandshurica_evm.model.chr3.886 Alkaloid NMT medium pass NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
fragaria_mandshurica_evm.model.chr3.909 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
fragaria_mandshurica_evm.model.chr3.991 Alkaloid NMT low borderline NMT__00059__sp_Q9M571_PEAMT_SPIOL
fragaria_mandshurica_evm.model.chr4.1114 Alkaloid NMT medium pass NMT__00024__sp_P0CB22_ATX2_ARATH
fragaria_mandshurica_evm.model.chr4.1165 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
fragaria_mandshurica_evm.model.chr4.1569.2 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
fragaria_mandshurica_evm.model.chr4.170 Alkaloid NMT low borderline NMT__00048__sp_Q8W595_SUVR4_ARATH
fragaria_mandshurica_evm.model.chr4.179 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
fragaria_mandshurica_evm.model.chr4.1945 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
fragaria_mandshurica_evm.model.chr4.2184 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
fragaria_mandshurica_evm.model.chr4.2547 Alkaloid NMT medium pass NMT__00068__sp_Q9XI84_RBCMT_ARATH
fragaria_mandshurica_evm.model.chr4.2693 Alkaloid NMT medium pass NMT__00052__sp_Q9AVJ9_MXMT1_COFAR
fragaria_mandshurica_evm.model.chr4.2732 Alkaloid NMT medium borderline NMT__00005__sp_A0A6C0WW36_CKTCS_CAMSB
fragaria_mandshurica_evm.model.chr4.2869 Alkaloid NMT medium borderline NMT__00029__sp_Q42963_PMT1_TOBAC