PlantSME Plant secondary metabolism enzyme database

Fragaria mandshurica (fragaria_mandshurica)

Imported from atlas release summary for Fragaria mandshurica.

1550
Candidate Protein Records
1321
Pathway-Level Records
3001
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 18 BAHD (153) View species results
Alkaloid pathway 304 22 NMT (45) View species results
Phenylpropanoid pathway 284 11 POD (104) View species results
Flavonoid pathway 165 11 UFGT (101) View species results
Rosmarinic acid pathway 96 7 C4H (34) View species results
Steroid pathway 85 13 CAS (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 246 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
fragaria_mandshurica_evm.model.chr3.1592 Phenylpropanoid CSE low borderline
fragaria_mandshurica_evm.model.chr3.2882 Phenylpropanoid CSE medium pass
fragaria_mandshurica_evm.model.chr3.3184 Phenylpropanoid CSE medium pass
fragaria_mandshurica_evm.model.chr3.413 Phenylpropanoid CSE medium pass
fragaria_mandshurica_evm.model.chr3.691 Phenylpropanoid CSE medium pass
fragaria_mandshurica_evm.model.chr3.716 Phenylpropanoid CSE medium pass
fragaria_mandshurica_evm.model.chr3.743 Phenylpropanoid CSE medium pass
fragaria_mandshurica_evm.model.chr3.744 Phenylpropanoid CSE medium pass
fragaria_mandshurica_evm.model.chr5.1684 Phenylpropanoid CSE medium pass
fragaria_mandshurica_evm.model.chr5.1685 Phenylpropanoid CSE low borderline
fragaria_mandshurica_evm.model.chr5.1686 Phenylpropanoid CSE medium pass
fragaria_mandshurica_evm.model.chr5.2081 Phenylpropanoid CSE medium pass
fragaria_mandshurica_evm.model.chr5.693 Phenylpropanoid CSE medium pass
fragaria_mandshurica_evm.model.chr6.1861 Phenylpropanoid CSE medium pass
fragaria_mandshurica_evm.model.chr6.1871 Phenylpropanoid CSE medium pass
fragaria_mandshurica_evm.model.chr6.2216 Phenylpropanoid CSE medium pass
fragaria_mandshurica_evm.model.chr6.2217 Phenylpropanoid CSE medium pass
fragaria_mandshurica_evm.model.chr6.2218 Phenylpropanoid CSE medium pass
fragaria_mandshurica_evm.model.chr6.2227 Phenylpropanoid CSE medium pass
fragaria_mandshurica_evm.model.chr6.463 Phenylpropanoid CSE medium pass
fragaria_mandshurica_evm.model.chr6.684 Phenylpropanoid CSE low borderline
fragaria_mandshurica_evm.model.chr7.264 Phenylpropanoid CSE medium pass
fragaria_mandshurica_evm.model.chr7.360 Phenylpropanoid CSE medium pass
fragaria_mandshurica_evm.model.chr7.745 Phenylpropanoid CSE medium pass
fragaria_mandshurica_evm.model.chr7.922 Phenylpropanoid CSE medium pass
fragaria_mandshurica_evm.model.chr7.948 Phenylpropanoid CSE medium pass
fragaria_mandshurica_evm.model.chr1.1374 Phenylpropanoid F5H/CYP84A medium borderline
fragaria_mandshurica_evm.model.chr1.1436 Phenylpropanoid F5H/CYP84A medium borderline
fragaria_mandshurica_evm.model.chr1.2674 Phenylpropanoid F5H/CYP84A medium borderline
fragaria_mandshurica_evm.model.chr2.679 Phenylpropanoid F5H/CYP84A medium borderline
fragaria_mandshurica_evm.model.chr3.2716 Phenylpropanoid F5H/CYP84A medium borderline
fragaria_mandshurica_evm.model.chr4.1930 Phenylpropanoid F5H/CYP84A medium borderline
fragaria_mandshurica_evm.model.chr4.1979 Phenylpropanoid F5H/CYP84A medium borderline
fragaria_mandshurica_evm.model.chr4.2323 Phenylpropanoid F5H/CYP84A medium borderline
fragaria_mandshurica_evm.model.chr5.1189 Phenylpropanoid F5H/CYP84A medium borderline
fragaria_mandshurica_evm.model.chr5.1224 Phenylpropanoid F5H/CYP84A medium borderline
fragaria_mandshurica_evm.model.chr5.260 Phenylpropanoid F5H/CYP84A medium borderline
fragaria_mandshurica_evm.model.chr5.678 Phenylpropanoid F5H/CYP84A medium borderline
fragaria_mandshurica_evm.model.chr5.956 Phenylpropanoid F5H/CYP84A medium borderline
fragaria_mandshurica_evm.model.chr6.1970 Phenylpropanoid F5H/CYP84A medium borderline
fragaria_mandshurica_evm.model.chr6.2403 Phenylpropanoid F5H/CYP84A medium borderline
fragaria_mandshurica_evm.model.chr6.2404 Phenylpropanoid F5H/CYP84A medium borderline
fragaria_mandshurica_evm.model.chr1.2090 Phenylpropanoid HCT low borderline
fragaria_mandshurica_evm.model.chr1.2200 Phenylpropanoid HCT low borderline
fragaria_mandshurica_evm.model.chr1.524 Phenylpropanoid HCT medium pass
fragaria_mandshurica_evm.model.chr2.1003 Phenylpropanoid HCT low borderline
fragaria_mandshurica_evm.model.chr2.1094 Phenylpropanoid HCT low borderline
fragaria_mandshurica_evm.model.chr2.3153 Phenylpropanoid HCT medium pass
fragaria_mandshurica_evm.model.chr2.3353 Phenylpropanoid HCT low borderline
fragaria_mandshurica_evm.model.chr3.2534 Phenylpropanoid HCT medium pass