PlantSME Plant secondary metabolism enzyme database

Fragaria mandshurica (fragaria_mandshurica)

Imported from atlas release summary for Fragaria mandshurica.

1550
Candidate Protein Records
1321
Pathway-Level Records
3001
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 18 BAHD (153) View species results
Alkaloid pathway 304 22 NMT (45) View species results
Phenylpropanoid pathway 284 11 POD (104) View species results
Flavonoid pathway 165 11 UFGT (101) View species results
Rosmarinic acid pathway 96 7 C4H (34) View species results
Steroid pathway 85 13 CAS (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 246 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
fragaria_mandshurica_evm.model.chr5.2006 Rosmarinic Acid RAS medium pass
fragaria_mandshurica_evm.model.chr5.2233 Rosmarinic Acid RAS low borderline
fragaria_mandshurica_evm.model.chr5.2626 Rosmarinic Acid RAS medium pass
fragaria_mandshurica_evm.model.chr6.1438 Rosmarinic Acid RAS medium pass
fragaria_mandshurica_evm.model.chr6.2250 Rosmarinic Acid RAS low borderline
fragaria_mandshurica_evm.model.chr6.411 Rosmarinic Acid RAS medium pass
fragaria_mandshurica_evm.model.chr7.1859 Rosmarinic Acid RAS medium pass
fragaria_mandshurica_evm.model.chr7.288 Rosmarinic Acid RAS low borderline
fragaria_mandshurica_evm.model.chr1.2090 Rosmarinic Acid TAT low borderline
fragaria_mandshurica_evm.model.chr1.2091 Rosmarinic Acid TAT medium pass
fragaria_mandshurica_evm.model.chr3.1378 Rosmarinic Acid TAT medium pass
fragaria_mandshurica_evm.model.chr3.1751 Rosmarinic Acid TAT medium pass
fragaria_mandshurica_evm.model.chr4.1464 Rosmarinic Acid TAT medium pass
fragaria_mandshurica_evm.model.chr4.1997 Rosmarinic Acid TAT medium pass
fragaria_mandshurica_evm.model.chr4.2016 Rosmarinic Acid TAT low borderline
fragaria_mandshurica_evm.model.chr5.2218 Rosmarinic Acid TAT low borderline
fragaria_mandshurica_evm.model.chr5.2247 Rosmarinic Acid TAT low borderline
fragaria_mandshurica_evm.model.chr6.2287 Rosmarinic Acid TAT medium pass
fragaria_mandshurica_evm.model.chr6.2288 Rosmarinic Acid TAT medium pass
fragaria_mandshurica_evm.model.chr6.2824 Rosmarinic Acid TAT medium pass
fragaria_mandshurica_evm.model.chr6.3144 Rosmarinic Acid TAT low borderline
fragaria_mandshurica_evm.model.chr7.1773 Rosmarinic Acid TAT low borderline
fragaria_mandshurica_evm.model.chr7.1795 Rosmarinic Acid TAT low borderline
fragaria_mandshurica_evm.model.chr1.1374 Steroid BR6OX1/CYP85A1 medium borderline
fragaria_mandshurica_evm.model.chr1.1436 Steroid BR6OX1/CYP85A1 medium borderline
fragaria_mandshurica_evm.model.chr2.1265 Steroid BR6OX1/CYP85A1 medium borderline
fragaria_mandshurica_evm.model.chr2.1266 Steroid BR6OX1/CYP85A1 medium borderline
fragaria_mandshurica_evm.model.chr2.1758 Steroid BR6OX1/CYP85A1 low borderline
fragaria_mandshurica_evm.model.chr2.2187 Steroid BR6OX1/CYP85A1 medium borderline
fragaria_mandshurica_evm.model.chr2.2600 Steroid BR6OX1/CYP85A1 medium borderline
fragaria_mandshurica_evm.model.chr2.2602 Steroid BR6OX1/CYP85A1 medium borderline
fragaria_mandshurica_evm.model.chr2.3328 Steroid BR6OX1/CYP85A1 medium borderline
fragaria_mandshurica_evm.model.chr2.348 Steroid BR6OX1/CYP85A1 low borderline
fragaria_mandshurica_evm.model.chr2.3482 Steroid BR6OX1/CYP85A1 low borderline
fragaria_mandshurica_evm.model.chr2.356 Steroid BR6OX1/CYP85A1 medium borderline
fragaria_mandshurica_evm.model.chr3.1021 Steroid BR6OX1/CYP85A1 medium borderline
fragaria_mandshurica_evm.model.chr3.2568 Steroid BR6OX1/CYP85A1 medium borderline
fragaria_mandshurica_evm.model.chr3.2755 Steroid BR6OX1/CYP85A1 medium borderline
fragaria_mandshurica_evm.model.chr4.1978 Steroid BR6OX1/CYP85A1 medium borderline
fragaria_mandshurica_evm.model.chr4.2155 Steroid BR6OX1/CYP85A1 medium borderline
fragaria_mandshurica_evm.model.chr4.2343 Steroid BR6OX1/CYP85A1 medium borderline
fragaria_mandshurica_evm.model.chr6.2255 Steroid BR6OX1/CYP85A1 medium borderline
fragaria_mandshurica_evm.model.chr6.2403 Steroid BR6OX1/CYP85A1 medium pass
fragaria_mandshurica_evm.model.chr6.532 Steroid BR6OX1/CYP85A1 low borderline
fragaria_mandshurica_evm.model.chr7.402 Steroid BR6OX1/CYP85A1 medium borderline
fragaria_mandshurica_evm.model.chr7.403 Steroid BR6OX1/CYP85A1 medium borderline
fragaria_mandshurica_evm.model.chr0.1122 Steroid BR6OX2/CYP85A2 low borderline
fragaria_mandshurica_evm.model.chr0.215 Steroid BR6OX2/CYP85A2 low borderline
fragaria_mandshurica_evm.model.chr0.407 Steroid BR6OX2/CYP85A2 low borderline
fragaria_mandshurica_evm.model.chr0.41 Steroid BR6OX2/CYP85A2 low borderline