PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2446
Candidate Protein Records
2044
Pathway-Level Records
5198
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Garb06G0001050 Alkaloid T16H medium borderline
Garb06G0005730 Alkaloid T16H medium borderline
Garb06G0028480 Alkaloid T16H medium borderline
Garb06G0030720 Alkaloid T16H medium borderline
Garb06G0033920 Alkaloid T16H medium borderline
Garb07G0006370 Alkaloid T16H medium borderline
Garb07G0024980 Alkaloid T16H medium borderline
Garb07G0031650 Alkaloid T16H medium borderline
Garb07G0031740 Alkaloid T16H medium borderline
Garb07G0031770 Alkaloid T16H medium borderline
Garb08G0002210 Alkaloid T16H medium borderline
Garb08G0002220 Alkaloid T16H low borderline
Garb08G0015890 Alkaloid T16H medium borderline
Garb08G0023380 Alkaloid T16H medium borderline
Garb09G0000110 Alkaloid T16H medium borderline
Garb09G0000800 Alkaloid T16H medium borderline
Garb09G0018300 Alkaloid T16H medium borderline
Garb10G0018820 Alkaloid T16H medium borderline
Garb10G0027050 Alkaloid T16H medium borderline
Garb10G0034800 Alkaloid T16H low borderline
Garb10G0036510 Alkaloid T16H medium borderline
Garb11G0021190 Alkaloid T16H low borderline
Garb11G0024390 Alkaloid T16H medium borderline
Garb13G0004890 Alkaloid T16H medium borderline
Garb13G0011710 Alkaloid T16H medium borderline
Garb13G0012670 Alkaloid T16H medium borderline
Garb01G0003150 Alkaloid T3O medium pass
Garb01G0004460 Alkaloid T3O medium borderline
Garb01G0008160 Alkaloid T3O medium borderline
Garb01G0013420 Alkaloid T3O medium borderline
Garb01G0013450 Alkaloid T3O medium borderline
Garb01G0013460 Alkaloid T3O medium borderline
Garb01G0018960 Alkaloid T3O medium borderline
Garb01G0021210 Alkaloid T3O medium pass
Garb01G0022290 Alkaloid T3O medium borderline
Garb01G0022320 Alkaloid T3O medium borderline
Garb01G0027830 Alkaloid T3O medium pass
Garb01G0031060 Alkaloid T3O medium borderline
Garb01G0032580 Alkaloid T3O medium pass
Garb01G0034500 Alkaloid T3O medium pass
Garb01G0035020 Alkaloid T3O medium borderline
Garb01G0035180 Alkaloid T3O medium pass
Garb02G0003460 Alkaloid T3O medium borderline
Garb02G0003470 Alkaloid T3O medium borderline
Garb02G0003490 Alkaloid T3O medium borderline
Garb02G0003770 Alkaloid T3O medium borderline
Garb02G0010570 Alkaloid T3O medium pass
Garb03G0000770 Alkaloid T3O medium pass
Garb03G0003150 Alkaloid T3O low borderline
Garb03G0003190 Alkaloid T3O medium pass