PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Garb01G0018290 Terpenoid AACT medium borderline
Garb04G0003580 Terpenoid AACT low borderline
Garb04G0013170 Terpenoid AACT medium borderline
Garb06G0019850 Terpenoid AACT low borderline
Garb07G0002220 Terpenoid AACT medium borderline
Garb09G0006660 Terpenoid AACT medium borderline
Garb09G0019390 Terpenoid AACT medium borderline
Garb01G0001000 Terpenoid BAHD medium pass
Garb01G0002670 Terpenoid BAHD medium pass
Garb01G0003800 Terpenoid BAHD medium pass
Garb01G0003840 Terpenoid BAHD medium pass
Garb01G0008780 Terpenoid BAHD low borderline
Garb01G0009280 Terpenoid BAHD medium pass
Garb01G0010520 Terpenoid BAHD medium pass
Garb01G0015370 Terpenoid BAHD medium pass
Garb01G0016030 Terpenoid BAHD medium pass
Garb01G0018010 Terpenoid BAHD medium pass
Garb01G0022060 Terpenoid BAHD low borderline
Garb01G0022800 Terpenoid BAHD medium pass
Garb01G0023660 Terpenoid BAHD low borderline
Garb01G0023990 Terpenoid BAHD medium pass
Garb01G0024880 Terpenoid BAHD medium pass
Garb01G0026320 Terpenoid BAHD medium pass
Garb01G0029600 Terpenoid BAHD low borderline
Garb01G0031410 Terpenoid BAHD medium pass
Garb01G0031850 Terpenoid BAHD medium pass
Garb01G0032750 Terpenoid BAHD low borderline
Garb02G0003230 Terpenoid BAHD medium pass
Garb02G0003640 Terpenoid BAHD medium pass
Garb02G0006940 Terpenoid BAHD medium pass
Garb02G0009950 Terpenoid BAHD medium pass
Garb02G0011600 Terpenoid BAHD medium pass
Garb02G0013650 Terpenoid BAHD medium pass
Garb02G0015070 Terpenoid BAHD low borderline
Garb03G0003200 Terpenoid BAHD medium pass
Garb03G0004530 Terpenoid BAHD medium pass
Garb03G0006230 Terpenoid BAHD medium pass
Garb03G0008330 Terpenoid BAHD medium pass
Garb03G0009710 Terpenoid BAHD low borderline
Garb03G0009930 Terpenoid BAHD medium pass
Garb03G0010410 Terpenoid BAHD medium pass
Garb03G0010850 Terpenoid BAHD medium pass
Garb03G0013090 Terpenoid BAHD medium pass
Garb03G0013130 Terpenoid BAHD medium pass
Garb03G0013190 Terpenoid BAHD medium pass
Garb03G0014570 Terpenoid BAHD medium pass
Garb03G0018480 Terpenoid BAHD medium pass
Garb03G0019050 Terpenoid BAHD medium pass
Garb03G0019070 Terpenoid BAHD low borderline
Garb03G0023320 Terpenoid BAHD medium pass