PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
Garb01G0003290 Flavonoid IFS low borderline
Garb01G0008160 Flavonoid IFS medium borderline
Garb01G0013420 Flavonoid IFS medium borderline
Garb01G0013450 Flavonoid IFS medium borderline
Garb01G0013460 Flavonoid IFS medium borderline
Garb01G0014320 Flavonoid IFS low borderline
Garb01G0015850 Flavonoid IFS medium borderline
Garb01G0015860 Flavonoid IFS low borderline
Garb01G0018960 Flavonoid IFS medium borderline
Garb01G0020030 Flavonoid IFS low borderline
Garb01G0021210 Flavonoid IFS low borderline
Garb01G0022290 Flavonoid IFS medium borderline
Garb01G0022310 Flavonoid IFS low borderline
Garb01G0022320 Flavonoid IFS medium borderline
Garb01G0025450 Flavonoid IFS medium borderline
Garb01G0025470 Flavonoid IFS medium borderline
Garb01G0028320 Flavonoid IFS medium borderline
Garb01G0032580 Flavonoid IFS low borderline
Garb01G0035020 Flavonoid IFS medium borderline
Garb02G0003460 Flavonoid IFS medium borderline
Garb02G0003470 Flavonoid IFS medium borderline
Garb02G0003480 Flavonoid IFS medium borderline
Garb02G0003490 Flavonoid IFS medium borderline
Garb02G0012100 Flavonoid IFS low borderline
Garb03G0003150 Flavonoid IFS low borderline
Garb03G0003170 Flavonoid IFS low borderline
Garb03G0003180 Flavonoid IFS low borderline
Garb03G0003190 Flavonoid IFS low borderline
Garb03G0004280 Flavonoid IFS medium borderline
Garb03G0004320 Flavonoid IFS medium borderline
Garb03G0006960 Flavonoid IFS low borderline
Garb03G0007680 Flavonoid IFS low borderline
Garb03G0026850 Flavonoid IFS low borderline
Garb04G0002610 Flavonoid IFS low borderline
Garb04G0004970 Flavonoid IFS low borderline
Garb04G0007050 Flavonoid IFS medium borderline
Garb04G0009230 Flavonoid IFS medium borderline
Garb04G0013000 Flavonoid IFS low borderline
Garb04G0019720 Flavonoid IFS medium borderline
Garb04G0020160 Flavonoid IFS low borderline
Garb04G0022370 Flavonoid IFS medium borderline
Garb04G0022500 Flavonoid IFS low borderline
Garb04G0022920 Flavonoid IFS low borderline
Garb04G0025350 Flavonoid IFS medium borderline
Garb04G0030180 Flavonoid IFS medium borderline
Garb04G0030190 Flavonoid IFS medium borderline
Garb04G0031960 Flavonoid IFS medium borderline
Garb05G0000860 Flavonoid IFS low borderline
Garb05G0008500 Flavonoid IFS medium borderline
Garb05G0010170 Flavonoid IFS low borderline