PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CCR
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Gene Pathway Family Confidence Status
Garb01G0002690 Phenylpropanoid CCR medium borderline
Garb01G0002710 Phenylpropanoid CCR medium borderline
Garb01G0011560 Phenylpropanoid CCR medium borderline
Garb01G0019620 Phenylpropanoid CCR medium pass
Garb01G0029170 Phenylpropanoid CCR medium pass
Garb01G0029840 Phenylpropanoid CCR low borderline
Garb02G0001440 Phenylpropanoid CCR medium borderline
Garb02G0003850 Phenylpropanoid CCR medium borderline
Garb02G0015970 Phenylpropanoid CCR medium borderline
Garb03G0001980 Phenylpropanoid CCR medium pass
Garb03G0014810 Phenylpropanoid CCR medium pass
Garb05G0007700 Phenylpropanoid CCR low borderline
Garb06G0025580 Phenylpropanoid CCR medium borderline
Garb07G0026990 Phenylpropanoid CCR low borderline
Garb07G0035410 Phenylpropanoid CCR low borderline
Garb08G0003230 Phenylpropanoid CCR low borderline
Garb09G0010600 Phenylpropanoid CCR low borderline
Garb09G0015070 Phenylpropanoid CCR medium pass
Garb10G0001240 Phenylpropanoid CCR medium borderline
Garb10G0028750 Phenylpropanoid CCR medium borderline
Garb10G0028760 Phenylpropanoid CCR medium borderline
Garb10G0028770 Phenylpropanoid CCR medium borderline
Garb10G0028780 Phenylpropanoid CCR medium borderline
Garb10G0028790 Phenylpropanoid CCR medium borderline
Garb10G0032750 Phenylpropanoid CCR medium borderline
Garb11G0023600 Phenylpropanoid CCR medium borderline
Garb12G0000510 Phenylpropanoid CCR medium pass
Garb12G0022250 Phenylpropanoid CCR low borderline
Garb13G0021570 Phenylpropanoid CCR medium borderline