PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status
Garb01G0003800 Rosmarinic Acid RAS medium pass
Garb01G0003840 Rosmarinic Acid RAS medium pass
Garb01G0015370 Rosmarinic Acid RAS medium pass
Garb01G0032190 Rosmarinic Acid RAS low borderline
Garb02G0004640 Rosmarinic Acid RAS low borderline
Garb02G0011600 Rosmarinic Acid RAS medium pass
Garb03G0019500 Rosmarinic Acid RAS low borderline
Garb04G0007620 Rosmarinic Acid RAS medium pass
Garb04G0007770 Rosmarinic Acid RAS medium pass
Garb04G0024480 Rosmarinic Acid RAS low borderline
Garb04G0034650 Rosmarinic Acid RAS low borderline
Garb06G0031850 Rosmarinic Acid RAS low borderline
Garb07G0003180 Rosmarinic Acid RAS low borderline
Garb08G0000320 Rosmarinic Acid RAS low borderline
Garb08G0006330 Rosmarinic Acid RAS low borderline
Garb08G0006360 Rosmarinic Acid RAS low borderline
Garb08G0017520 Rosmarinic Acid RAS medium pass
Garb08G0019030 Rosmarinic Acid RAS low borderline
Garb08G0019630 Rosmarinic Acid RAS low borderline
Garb08G0023250 Rosmarinic Acid RAS low borderline
Garb09G0013760 Rosmarinic Acid RAS low borderline
Garb09G0017100 Rosmarinic Acid RAS low borderline
Garb09G0018660 Rosmarinic Acid RAS medium pass
Garb10G0016730 Rosmarinic Acid RAS low borderline
Garb10G0032570 Rosmarinic Acid RAS medium pass
Garb12G0004980 Rosmarinic Acid RAS medium pass
Garb12G0011220 Rosmarinic Acid RAS medium pass
Garb12G0011230 Rosmarinic Acid RAS medium pass
Garb12G0011240 Rosmarinic Acid RAS medium pass
Garb12G0011340 Rosmarinic Acid RAS medium pass
Garb12G0011350 Rosmarinic Acid RAS medium pass
Garb12G0017610 Rosmarinic Acid RAS low borderline
Garb12G0022000 Rosmarinic Acid RAS low borderline
Garb12G0022830 Rosmarinic Acid RAS low borderline
Garb12G0024610 Rosmarinic Acid RAS low borderline
Garb13G0005090 Rosmarinic Acid RAS low borderline
Garb13G0008990 Rosmarinic Acid RAS low borderline
Garb13G0026340 Rosmarinic Acid RAS medium pass
Garb13G0026350 Rosmarinic Acid RAS medium pass