PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
Garb01G0030130 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Garb02G0001270 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Garb02G0005650 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Garb02G0013660 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Garb02G0014100 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Garb03G0024970 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Garb04G0000790 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Garb04G0022760 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Garb04G0031300 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Garb06G0006420 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Garb06G0008320 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Garb06G0011610 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Garb06G0027230 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
Garb06G0028080 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Garb06G0028090 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Garb06G0028120 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Garb06G0028130 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Garb06G0028140 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Garb06G0028150 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Garb06G0028160 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Garb06G0028180 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Garb06G0028200 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Garb06G0028210 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Garb06G0028220 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Garb07G0005900 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Garb07G0007920 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Garb07G0007960 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Garb07G0016780 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Garb07G0021710 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Garb07G0030990 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Garb07G0031010 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Garb07G0031020 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Garb08G0015250 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Garb08G0015310 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Garb08G0015320 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Garb08G0015340 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Garb08G0018020 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Garb08G0019150 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Garb09G0010800 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Garb09G0011160 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Garb09G0016700 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Garb09G0017860 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Garb10G0002970 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Garb10G0017400 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Garb10G0017410 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Garb10G0020790 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Garb10G0020800 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Garb10G0020810 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Garb10G0020820 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Garb10G0020830 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH