PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
Garb01G0010750 Alkaloid GS low borderline
Garb01G0010810 Alkaloid GS low borderline
Garb01G0014650 Alkaloid GS low borderline
Garb01G0014660 Alkaloid GS low borderline
Garb01G0019800 Alkaloid GS low borderline
Garb01G0019810 Alkaloid GS low borderline
Garb01G0019820 Alkaloid GS low borderline
Garb01G0019830 Alkaloid GS low borderline
Garb01G0019840 Alkaloid GS low borderline
Garb01G0030630 Alkaloid GS low borderline
Garb01G0030640 Alkaloid GS low borderline
Garb01G0030650 Alkaloid GS low borderline
Garb01G0030660 Alkaloid GS low borderline
Garb02G0007870 Alkaloid GS medium pass
Garb02G0007880 Alkaloid GS low borderline
Garb02G0010170 Alkaloid GS high pass
Garb02G0012480 Alkaloid GS low borderline
Garb02G0016250 Alkaloid GS high pass
Garb02G0016340 Alkaloid GS high pass
Garb03G0025780 Alkaloid GS medium pass
Garb04G0000010 Alkaloid GS high pass
Garb04G0000020 Alkaloid GS high pass
Garb04G0023170 Alkaloid GS high pass
Garb04G0029340 Alkaloid GS high pass
Garb05G0000320 Alkaloid GS low borderline
Garb05G0015470 Alkaloid GS high pass
Garb06G0006360 Alkaloid GS high pass
Garb06G0006370 Alkaloid GS low borderline
Garb06G0017100 Alkaloid GS high pass
Garb06G0019200 Alkaloid GS high pass
Garb06G0019210 Alkaloid GS high pass
Garb06G0019230 Alkaloid GS high pass
Garb06G0019240 Alkaloid GS high pass
Garb06G0033450 Alkaloid GS medium pass
Garb06G0033460 Alkaloid GS medium pass
Garb07G0025650 Alkaloid GS low borderline
Garb08G0018950 Alkaloid GS high pass
Garb09G0006120 Alkaloid GS high pass
Garb09G0010530 Alkaloid GS low borderline
Garb09G0012780 Alkaloid GS low borderline
Garb09G0014980 Alkaloid GS low borderline
Garb10G0006560 Alkaloid GS low borderline
Garb10G0006570 Alkaloid GS low borderline
Garb10G0028910 Alkaloid GS low borderline
Garb11G0000460 Alkaloid GS medium pass
Garb12G0017140 Alkaloid GS low borderline
Garb13G0015080 Alkaloid GS low borderline
Garb13G0015090 Alkaloid GS low borderline
Garb13G0030540 Alkaloid GS low borderline