PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Gene Pathway Family Confidence Status
Garb01G0013460 Steroid CYP90D1 low borderline
Garb01G0019770 Steroid CYP90D1 low borderline
Garb01G0028320 Steroid CYP90D1 low borderline
Garb02G0003460 Steroid CYP90D1 low borderline
Garb02G0003470 Steroid CYP90D1 low borderline
Garb02G0003480 Steroid CYP90D1 low borderline
Garb03G0004320 Steroid CYP90D1 medium borderline
Garb03G0006960 Steroid CYP90D1 low borderline
Garb04G0003840 Steroid CYP90D1 low borderline
Garb04G0007040 Steroid CYP90D1 low borderline
Garb04G0008710 Steroid CYP90D1 low borderline
Garb04G0022920 Steroid CYP90D1 medium borderline
Garb05G0011990 Steroid CYP90D1 low borderline
Garb05G0012020 Steroid CYP90D1 low borderline
Garb05G0012070 Steroid CYP90D1 low borderline
Garb05G0012090 Steroid CYP90D1 low borderline
Garb05G0012110 Steroid CYP90D1 low borderline
Garb05G0016130 Steroid CYP90D1 low borderline
Garb05G0016150 Steroid CYP90D1 low borderline
Garb05G0016170 Steroid CYP90D1 low borderline
Garb05G0017840 Steroid CYP90D1 low borderline
Garb06G0000230 Steroid CYP90D1 low borderline
Garb06G0002420 Steroid CYP90D1 low borderline
Garb06G0005730 Steroid CYP90D1 low borderline
Garb06G0008480 Steroid CYP90D1 low borderline
Garb06G0017450 Steroid CYP90D1 low borderline
Garb06G0030720 Steroid CYP90D1 low borderline
Garb07G0006260 Steroid CYP90D1 low borderline
Garb07G0013610 Steroid CYP90D1 medium borderline
Garb07G0022980 Steroid CYP90D1 low borderline
Garb07G0028520 Steroid CYP90D1 low borderline
Garb07G0031650 Steroid CYP90D1 low borderline
Garb07G0031730 Steroid CYP90D1 low borderline
Garb07G0031750 Steroid CYP90D1 low borderline
Garb07G0031770 Steroid CYP90D1 low borderline
Garb08G0002490 Steroid CYP90D1 low borderline
Garb08G0015660 Steroid CYP90D1 medium borderline
Garb08G0016670 Steroid CYP90D1 medium borderline
Garb09G0016230 Steroid CYP90D1 low borderline
Garb09G0017600 Steroid CYP90D1 medium borderline
Garb09G0019280 Steroid CYP90D1 low borderline
Garb09G0020490 Steroid CYP90D1 medium borderline
Garb10G0018820 Steroid CYP90D1 medium borderline
Garb10G0022730 Steroid CYP90D1 low borderline
Garb10G0022740 Steroid CYP90D1 low borderline
Garb10G0023110 Steroid CYP90D1 low borderline
Garb10G0023130 Steroid CYP90D1 low borderline
Garb10G0036500 Steroid CYP90D1 low borderline
Garb11G0003870 Steroid CYP90D1 low borderline
Garb11G0024390 Steroid CYP90D1 low borderline