PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FNS
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Gene Pathway Family Confidence Status
Garb01G0000980 Flavonoid FNS low borderline
Garb01G0003150 Flavonoid FNS medium borderline
Garb01G0004460 Flavonoid FNS medium borderline
Garb01G0011350 Flavonoid FNS medium borderline
Garb01G0013440 Flavonoid FNS medium borderline
Garb01G0019770 Flavonoid FNS medium borderline
Garb01G0022300 Flavonoid FNS medium borderline
Garb01G0027830 Flavonoid FNS medium borderline
Garb01G0029030 Flavonoid FNS medium borderline
Garb04G0014300 Flavonoid FNS medium borderline
Garb04G0024910 Flavonoid FNS medium borderline
Garb04G0029550 Flavonoid FNS low borderline
Garb06G0001050 Flavonoid FNS medium borderline
Garb06G0002780 Flavonoid FNS medium borderline
Garb06G0028480 Flavonoid FNS medium borderline
Garb07G0006410 Flavonoid FNS medium borderline
Garb07G0022980 Flavonoid FNS medium borderline
Garb08G0002200 Flavonoid FNS medium borderline
Garb08G0002210 Flavonoid FNS medium borderline
Garb08G0009750 Flavonoid FNS low borderline
Garb10G0005730 Flavonoid FNS medium borderline
Garb10G0017440 Flavonoid FNS medium borderline
Garb10G0034800 Flavonoid FNS medium borderline
Garb11G0010050 Flavonoid FNS medium borderline
Garb11G0022800 Flavonoid FNS medium borderline
Garb11G0024390 Flavonoid FNS medium borderline
Garb11G0025570 Flavonoid FNS medium borderline
Garb12G0008290 Flavonoid FNS medium borderline
Garb12G0014580 Flavonoid FNS medium borderline
Garb12G0024830 Flavonoid FNS low borderline
Garb12G0026630 Flavonoid FNS low borderline
Garb13G0004830 Flavonoid FNS medium borderline
Garb13G0004890 Flavonoid FNS medium borderline
Garb13G0011030 Flavonoid FNS medium borderline