PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COMT
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Gene Pathway Family Confidence Status
Garb01G0023700 Phenylpropanoid COMT medium pass
Garb01G0023730 Phenylpropanoid COMT medium pass
Garb01G0031510 Phenylpropanoid COMT medium pass
Garb03G0015740 Phenylpropanoid COMT medium pass
Garb03G0017330 Phenylpropanoid COMT medium pass
Garb03G0017340 Phenylpropanoid COMT medium pass
Garb03G0017350 Phenylpropanoid COMT medium pass
Garb03G0027450 Phenylpropanoid COMT low borderline
Garb04G0006360 Phenylpropanoid COMT low borderline
Garb04G0009460 Phenylpropanoid COMT medium pass
Garb05G0005850 Phenylpropanoid COMT medium pass
Garb05G0005860 Phenylpropanoid COMT medium pass
Garb05G0005890 Phenylpropanoid COMT medium pass
Garb05G0016910 Phenylpropanoid COMT low borderline
Garb06G0002570 Phenylpropanoid COMT medium pass
Garb06G0002580 Phenylpropanoid COMT medium pass
Garb06G0002590 Phenylpropanoid COMT medium pass
Garb06G0016370 Phenylpropanoid COMT medium pass
Garb06G0024210 Phenylpropanoid COMT medium pass
Garb06G0024230 Phenylpropanoid COMT medium pass
Garb08G0001570 Phenylpropanoid COMT medium pass
Garb08G0010620 Phenylpropanoid COMT low borderline
Garb08G0022140 Phenylpropanoid COMT medium pass
Garb09G0003270 Phenylpropanoid COMT medium pass
Garb09G0003280 Phenylpropanoid COMT medium pass
Garb09G0005850 Phenylpropanoid COMT medium pass
Garb09G0018440 Phenylpropanoid COMT medium pass
Garb09G0018460 Phenylpropanoid COMT medium pass
Garb09G0018470 Phenylpropanoid COMT medium pass
Garb09G0018490 Phenylpropanoid COMT medium pass
Garb11G0027900 Phenylpropanoid COMT medium pass
Garb11G0027910 Phenylpropanoid COMT medium pass
Garb11G0031150 Phenylpropanoid COMT medium pass
Garb12G0004300 Phenylpropanoid COMT low borderline
Garb12G0015830 Phenylpropanoid COMT medium pass
Garb12G0015840 Phenylpropanoid COMT medium pass
Garb12G0019070 Phenylpropanoid COMT medium pass
Garb13G0000180 Phenylpropanoid COMT low borderline
Garb13G0023620 Phenylpropanoid COMT medium pass
Garb13G0023630 Phenylpropanoid COMT medium pass
Garb13G0023640 Phenylpropanoid COMT medium pass
Garb13G0023680 Phenylpropanoid COMT medium pass
Garb13G0023690 Phenylpropanoid COMT medium pass
Garb13G0023700 Phenylpropanoid COMT medium pass
Garb13G0023710 Phenylpropanoid COMT medium pass
Garb13G0025530 Phenylpropanoid COMT medium pass
Garb13G0025540 Phenylpropanoid COMT medium pass
Garb13G0025560 Phenylpropanoid COMT medium pass