PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status Best Target
Garb03G0024580 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Garb04G0004990 Terpenoid BAHD medium pass BAHD__00083__sp_Q9LMM0_GPAT4_ARATH
Garb04G0007620 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Garb04G0007640 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Garb04G0007710 Terpenoid BAHD medium pass BAHD__00082__sp_Q9LLY4_LPAT1_BRANA
Garb04G0007770 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Garb04G0008200 Terpenoid BAHD medium pass BAHD__00095__sp_Q9SZ58_BRAT1_ARATH
Garb04G0011180 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Garb04G0011240 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Garb04G0012600 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Garb04G0014730 Terpenoid BAHD medium pass BAHD__00004__sp_A0A0M4FCN7_RAM2_PETHY
Garb04G0015780 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Garb04G0021410 Terpenoid BAHD medium pass BAHD__00075__sp_Q9FJB4_GPC1_ARATH
Garb04G0021470 Terpenoid BAHD medium pass BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
Garb04G0024720 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
Garb04G0025540 Terpenoid BAHD medium pass BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Garb04G0027360 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
Garb04G0027370 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
Garb04G0028740 Terpenoid BAHD low borderline BAHD__00028__sp_O80467_SDT_ARATH
Garb04G0031440 Terpenoid BAHD medium pass BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
Garb04G0034630 Terpenoid BAHD medium pass BAHD__00069__sp_Q9C5W0_DGAT3_ARATH
Garb04G0034650 Terpenoid BAHD medium pass BAHD__00007__sp_A0A2Z5CVK5_AT2_CROXC
Garb05G0002900 Terpenoid BAHD medium pass BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
Garb05G0006540 Terpenoid BAHD low borderline BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF
Garb05G0010800 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Garb05G0015370 Terpenoid BAHD medium pass BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
Garb05G0015660 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
Garb05G0015680 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
Garb06G0000560 Terpenoid BAHD medium pass BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Garb06G0001410 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
Garb06G0007450 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Garb06G0010810 Terpenoid BAHD medium pass BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
Garb06G0011190 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Garb06G0012490 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Garb06G0012530 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Garb06G0014050 Terpenoid BAHD medium pass BAHD__00084__sp_Q9M115_ZDH16_ARATH
Garb06G0014070 Terpenoid BAHD medium pass BAHD__00084__sp_Q9M115_ZDH16_ARATH
Garb06G0014710 Terpenoid BAHD medium pass BAHD__00021__sp_K7K424_DAT2D_SOYBN
Garb06G0014720 Terpenoid BAHD medium pass BAHD__00021__sp_K7K424_DAT2D_SOYBN
Garb06G0014730 Terpenoid BAHD medium pass BAHD__00021__sp_K7K424_DAT2D_SOYBN
Garb06G0014740 Terpenoid BAHD medium pass BAHD__00021__sp_K7K424_DAT2D_SOYBN
Garb06G0019550 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Garb06G0029830 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Garb06G0030960 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Garb07G0002040 Terpenoid BAHD medium pass BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Garb07G0005980 Terpenoid BAHD medium pass BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
Garb07G0011520 Terpenoid BAHD medium pass BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Garb07G0012350 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Garb07G0021020 Terpenoid BAHD medium pass BAHD__00058__sp_Q8LG50_LPAT2_ARATH
Garb07G0021610 Terpenoid BAHD medium pass BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN