PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status Best Target
Garb07G0022190 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Garb07G0025350 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Garb07G0025360 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Garb07G0028430 Terpenoid BAHD medium pass BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Garb07G0028900 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Garb07G0031140 Terpenoid BAHD medium pass BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
Garb07G0031180 Terpenoid BAHD medium pass BAHD__00033__sp_P0DXG0_AT_STRYX
Garb07G0031990 Terpenoid BAHD medium pass BAHD__00058__sp_Q8LG50_LPAT2_ARATH
Garb07G0032040 Terpenoid BAHD medium pass BAHD__00057__sp_Q8L7R3_LPCT1_ARATH
Garb07G0032380 Terpenoid BAHD medium pass BAHD__00057__sp_Q8L7R3_LPCT1_ARATH
Garb07G0034070 Terpenoid BAHD medium pass BAHD__00097__sp_Q9ZV87_NAPES_ARATH
Garb08G0000170 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Garb08G0000910 Terpenoid BAHD medium pass BAHD__00053__sp_Q8GXU8_LPAT1_ARATH
Garb08G0003370 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Garb08G0006330 Terpenoid BAHD low borderline BAHD__00008__sp_A0A2Z5CVQ4_AT1_CROXC
Garb08G0006350 Terpenoid BAHD low borderline BAHD__00008__sp_A0A2Z5CVQ4_AT1_CROXC
Garb08G0006360 Terpenoid BAHD low borderline BAHD__00008__sp_A0A2Z5CVQ4_AT1_CROXC
Garb08G0006390 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Garb08G0006400 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Garb08G0006430 Terpenoid BAHD low borderline BAHD__00008__sp_A0A2Z5CVQ4_AT1_CROXC
Garb08G0008970 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Garb08G0011790 Terpenoid BAHD medium pass BAHD__00089__sp_Q9SB58_ZDH19_ARATH
Garb08G0012300 Terpenoid BAHD medium pass BAHD__00092__sp_Q9SU91_LPXA_ARATH
Garb08G0014320 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Garb08G0017520 Terpenoid BAHD low borderline BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
Garb08G0018450 Terpenoid BAHD medium pass BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
Garb08G0019380 Terpenoid BAHD medium pass BAHD__00023__sp_O22975_LPAAT_ARATH
Garb08G0019950 Terpenoid BAHD medium pass BAHD__00057__sp_Q8L7R3_LPCT1_ARATH
Garb08G0022180 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Garb08G0026100 Terpenoid BAHD medium pass BAHD__00085__sp_Q9M1K5_ZDH13_ARATH
Garb08G0026710 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
Garb08G0026730 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
Garb09G0002090 Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH
Garb09G0002100 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Garb09G0003000 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Garb09G0003150 Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Garb09G0005170 Terpenoid BAHD medium pass BAHD__00043__sp_Q52T38_ZDH22_ARATH
Garb09G0008930 Terpenoid BAHD medium pass BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Garb09G0009850 Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Garb09G0010500 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Garb09G0012440 Terpenoid BAHD medium pass BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
Garb09G0013110 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Garb09G0014190 Terpenoid BAHD medium pass BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Garb09G0017720 Terpenoid BAHD medium pass BAHD__00089__sp_Q9SB58_ZDH19_ARATH
Garb09G0018660 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Garb09G0019630 Terpenoid BAHD medium pass BAHD__00062__sp_Q93V61_LCAT3_ARATH
Garb09G0020860 Terpenoid BAHD low borderline BAHD__00095__sp_Q9SZ58_BRAT1_ARATH
Garb09G0022230 Terpenoid BAHD medium pass BAHD__00071__sp_Q9CAY3_GPAT5_ARATH
Garb09G0023530 Terpenoid BAHD medium pass BAHD__00022__sp_K7PEY4_RAM2_MEDTR
Garb10G0002850 Terpenoid BAHD medium pass BAHD__00089__sp_Q9SB58_ZDH19_ARATH