PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Family-Level Assignments
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Family-Level Assignments Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Family-level assignments Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status Best Target
Garb10G0004960 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Garb10G0007660 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
Garb10G0007810 Terpenoid BAHD medium pass BAHD__00050__sp_Q6DR03_ZDHC3_ARATH
Garb10G0009290 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Garb10G0009300 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Garb10G0009910 Terpenoid BAHD low borderline BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Garb10G0010130 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Garb10G0012630 Terpenoid BAHD medium pass BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
Garb10G0012640 Terpenoid BAHD medium pass BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
Garb10G0012650 Terpenoid BAHD medium pass BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
Garb10G0012670 Terpenoid BAHD medium pass BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
Garb10G0012690 Terpenoid BAHD medium pass BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
Garb10G0013250 Terpenoid BAHD low borderline BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Garb10G0015570 Terpenoid BAHD medium pass BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Garb10G0015580 Terpenoid BAHD medium pass BAHD__00070__sp_Q9CAN8_MBOA2_ARATH
Garb10G0017170 Terpenoid BAHD medium pass BAHD__00057__sp_Q8L7R3_LPCT1_ARATH
Garb10G0019090 Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Garb10G0019470 Terpenoid BAHD medium pass BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
Garb10G0022620 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Garb10G0022630 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Garb10G0023410 Terpenoid BAHD medium pass BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
Garb10G0025840 Terpenoid BAHD medium pass BAHD__00043__sp_Q52T38_ZDH22_ARATH
Garb10G0027360 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Garb10G0030570 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
Garb10G0030580 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
Garb10G0032430 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
Garb10G0032570 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Garb10G0034230 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Garb10G0039040 Terpenoid BAHD medium pass BAHD__00034__sp_P10349_GPAT2_CUCMO
Garb10G0039530 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Garb11G0003990 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Garb11G0005320 Terpenoid BAHD medium pass BAHD__00027__sp_O80437_GPAT6_ARATH
Garb11G0005930 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Garb11G0008590 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
Garb11G0011450 Terpenoid BAHD medium pass BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Garb11G0014360 Terpenoid BAHD medium pass BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
Garb11G0021610 Terpenoid BAHD medium pass BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
Garb11G0022110 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Garb11G0022320 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Garb11G0024220 Terpenoid BAHD medium pass BAHD__00058__sp_Q8LG50_LPAT2_ARATH
Garb11G0028320 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Garb12G0002730 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Garb12G0002800 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Garb12G0003950 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Garb12G0004980 Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Garb12G0005520 Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH
Garb12G0005750 Terpenoid BAHD medium pass BAHD__00027__sp_O80437_GPAT6_ARATH
Garb12G0006350 Terpenoid BAHD medium pass BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
Garb12G0006460 Terpenoid BAHD medium pass BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Garb12G0008530 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH