PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2446
Candidate Protein Records
2044
Pathway-Level Records
5198
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Garb08G0015890 Phenylpropanoid C3'H/CYP98A medium borderline
Garb08G0015900 Phenylpropanoid C3'H/CYP98A medium borderline
Garb08G0015910 Phenylpropanoid C3'H/CYP98A medium borderline
Garb08G0016370 Phenylpropanoid C3'H/CYP98A low borderline
Garb08G0016670 Phenylpropanoid C3'H/CYP98A low borderline
Garb08G0023380 Phenylpropanoid C3'H/CYP98A medium borderline
Garb08G0027210 Phenylpropanoid C3'H/CYP98A low borderline
Garb08G0027860 Phenylpropanoid C3'H/CYP98A low borderline
Garb09G0000080 Phenylpropanoid C3'H/CYP98A medium borderline
Garb09G0000120 Phenylpropanoid C3'H/CYP98A medium borderline
Garb09G0000130 Phenylpropanoid C3'H/CYP98A medium borderline
Garb09G0000140 Phenylpropanoid C3'H/CYP98A medium borderline
Garb09G0000150 Phenylpropanoid C3'H/CYP98A medium borderline
Garb09G0000800 Phenylpropanoid C3'H/CYP98A medium borderline
Garb09G0003220 Phenylpropanoid C3'H/CYP98A medium borderline
Garb09G0003240 Phenylpropanoid C3'H/CYP98A medium borderline
Garb09G0003250 Phenylpropanoid C3'H/CYP98A medium borderline
Garb09G0004270 Phenylpropanoid C3'H/CYP98A medium borderline
Garb09G0014730 Phenylpropanoid C3'H/CYP98A low borderline
Garb09G0016230 Phenylpropanoid C3'H/CYP98A medium borderline
Garb09G0016240 Phenylpropanoid C3'H/CYP98A medium borderline
Garb09G0016810 Phenylpropanoid C3'H/CYP98A low borderline
Garb09G0017600 Phenylpropanoid C3'H/CYP98A low borderline
Garb09G0017890 Phenylpropanoid C3'H/CYP98A low borderline
Garb09G0018450 Phenylpropanoid C3'H/CYP98A low borderline
Garb09G0019280 Phenylpropanoid C3'H/CYP98A medium borderline
Garb09G0020440 Phenylpropanoid C3'H/CYP98A low borderline
Garb09G0020490 Phenylpropanoid C3'H/CYP98A low borderline
Garb10G0001470 Phenylpropanoid C3'H/CYP98A low borderline
Garb10G0001490 Phenylpropanoid C3'H/CYP98A medium borderline
Garb10G0001740 Phenylpropanoid C3'H/CYP98A high pass
Garb10G0005220 Phenylpropanoid C3'H/CYP98A low borderline
Garb10G0005730 Phenylpropanoid C3'H/CYP98A medium borderline
Garb10G0005780 Phenylpropanoid C3'H/CYP98A medium borderline
Garb10G0012930 Phenylpropanoid C3'H/CYP98A medium borderline
Garb10G0014520 Phenylpropanoid C3'H/CYP98A medium borderline
Garb10G0014550 Phenylpropanoid C3'H/CYP98A medium borderline
Garb10G0017430 Phenylpropanoid C3'H/CYP98A medium pass
Garb10G0018820 Phenylpropanoid C3'H/CYP98A low borderline
Garb10G0021110 Phenylpropanoid C3'H/CYP98A low borderline
Garb10G0021120 Phenylpropanoid C3'H/CYP98A low borderline
Garb10G0022730 Phenylpropanoid C3'H/CYP98A medium borderline
Garb10G0022740 Phenylpropanoid C3'H/CYP98A medium borderline
Garb10G0023040 Phenylpropanoid C3'H/CYP98A medium borderline
Garb10G0023110 Phenylpropanoid C3'H/CYP98A medium borderline
Garb10G0023130 Phenylpropanoid C3'H/CYP98A medium borderline
Garb10G0023140 Phenylpropanoid C3'H/CYP98A medium borderline
Garb10G0024670 Phenylpropanoid C3'H/CYP98A low borderline
Garb10G0026530 Phenylpropanoid C3'H/CYP98A low borderline
Garb10G0027050 Phenylpropanoid C3'H/CYP98A low borderline