PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2446
Candidate Protein Records
2044
Pathway-Level Records
5198
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Garb13G0004010 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0004830 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0004890 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0004900 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0004920 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0010830 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0011030 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0011050 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0011090 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0011590 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0011710 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0012240 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0012670 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0012870 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0014480 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0016570 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0016580 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0016600 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0016630 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0017280 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0017840 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0019170 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0020290 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0020360 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0022430 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0022440 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0025240 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0025740 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0028800 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0029680 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0033400 Phenylpropanoid C3'H/CYP98A medium borderline
Garb01G0013440 Phenylpropanoid C4H/CYP73A low borderline
Garb01G0022300 Phenylpropanoid C4H/CYP73A low borderline
Garb01G0031050 Phenylpropanoid C4H/CYP73A low borderline
Garb03G0004310 Phenylpropanoid C4H/CYP73A low borderline
Garb03G0004610 Phenylpropanoid C4H/CYP73A medium pass
Garb04G0014300 Phenylpropanoid C4H/CYP73A low borderline
Garb05G0011990 Phenylpropanoid C4H/CYP73A medium borderline
Garb05G0012020 Phenylpropanoid C4H/CYP73A medium borderline
Garb05G0012030 Phenylpropanoid C4H/CYP73A medium borderline
Garb05G0012100 Phenylpropanoid C4H/CYP73A low borderline
Garb05G0016150 Phenylpropanoid C4H/CYP73A medium borderline
Garb05G0016160 Phenylpropanoid C4H/CYP73A medium borderline
Garb05G0016180 Phenylpropanoid C4H/CYP73A medium pass
Garb05G0016190 Phenylpropanoid C4H/CYP73A medium borderline
Garb06G0013730 Phenylpropanoid C4H/CYP73A low borderline
Garb07G0028520 Phenylpropanoid C4H/CYP73A medium borderline
Garb07G0030840 Phenylpropanoid C4H/CYP73A low borderline
Garb07G0031720 Phenylpropanoid C4H/CYP73A low borderline
Garb08G0002240 Phenylpropanoid C4H/CYP73A low borderline