PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2446
Candidate Protein Records
2044
Pathway-Level Records
5198
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status Best Target
Garb07G0020180 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb07G0020190 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb07G0020230 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb07G0020750 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb07G0027670 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Garb08G0006230 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb08G0019480 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Garb08G0023160 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb09G0014050 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb09G0014060 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb10G0005550 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb10G0007430 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb10G0007440 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb10G0034210 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb11G0023880 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb12G0010460 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb12G0010480 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb12G0010490 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb12G0010500 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb12G0010530 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb12G0010540 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb12G0010550 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb12G0013840 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb12G0021460 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Garb12G0029170 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb13G0011810 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb13G0020050 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb01G0011350 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Garb01G0017310 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Garb01G0017320 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Garb01G0019770 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Garb01G0035020 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Garb02G0003490 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Garb03G0027810 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Garb04G0000450 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Garb04G0007040 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Garb04G0007050 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Garb04G0013640 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Garb04G0020170 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Garb06G0001050 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Garb06G0002780 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Garb06G0011710 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Garb06G0012900 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Garb06G0028480 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Garb06G0033120 Phenylpropanoid F5H/CYP84A low borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Garb07G0011760 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Garb07G0022980 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Garb07G0024960 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Garb09G0000100 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Garb09G0000110 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH