PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2446
Candidate Protein Records
2044
Pathway-Level Records
5198
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Garb07G0022980 Steroid CYP90D1 low borderline
Garb07G0028520 Steroid CYP90D1 low borderline
Garb07G0031650 Steroid CYP90D1 low borderline
Garb07G0031730 Steroid CYP90D1 low borderline
Garb07G0031750 Steroid CYP90D1 low borderline
Garb07G0031770 Steroid CYP90D1 low borderline
Garb08G0002490 Steroid CYP90D1 low borderline
Garb08G0015660 Steroid CYP90D1 medium borderline
Garb08G0016670 Steroid CYP90D1 medium borderline
Garb09G0016230 Steroid CYP90D1 low borderline
Garb09G0017600 Steroid CYP90D1 medium borderline
Garb09G0019280 Steroid CYP90D1 low borderline
Garb09G0020490 Steroid CYP90D1 medium borderline
Garb10G0018820 Steroid CYP90D1 medium borderline
Garb10G0022730 Steroid CYP90D1 low borderline
Garb10G0022740 Steroid CYP90D1 low borderline
Garb10G0023110 Steroid CYP90D1 low borderline
Garb10G0023130 Steroid CYP90D1 low borderline
Garb10G0036500 Steroid CYP90D1 low borderline
Garb11G0003870 Steroid CYP90D1 low borderline
Garb11G0024390 Steroid CYP90D1 low borderline
Garb11G0024430 Steroid CYP90D1 low borderline
Garb12G0008300 Steroid CYP90D1 low borderline
Garb12G0015340 Steroid CYP90D1 low borderline
Garb12G0026670 Steroid CYP90D1 low borderline
Garb12G0031160 Steroid CYP90D1 low borderline
Garb13G0001300 Steroid CYP90D1 low borderline
Garb13G0002170 Steroid CYP90D1 low borderline
Garb13G0002850 Steroid CYP90D1 low borderline
Garb13G0004830 Steroid CYP90D1 medium borderline
Garb13G0004920 Steroid CYP90D1 low borderline
Garb13G0010950 Steroid CYP90D1 low borderline
Garb13G0011060 Steroid CYP90D1 low borderline
Garb13G0011090 Steroid CYP90D1 low borderline
Garb13G0011110 Steroid CYP90D1 low borderline
Garb13G0011590 Steroid CYP90D1 low borderline
Garb13G0011600 Steroid CYP90D1 low borderline
Garb13G0011610 Steroid CYP90D1 low borderline
Garb13G0012870 Steroid CYP90D1 medium borderline
Garb13G0016580 Steroid CYP90D1 low borderline
Garb13G0016630 Steroid CYP90D1 low borderline
Garb13G0017280 Steroid CYP90D1 low borderline
Garb13G0028800 Steroid CYP90D1 medium borderline
Garb13G0029680 Steroid CYP90D1 low borderline
Garb13G0033360 Steroid CYP90D1 low borderline
Garb01G0032430 Steroid DET2 low borderline
Garb09G0000330 Steroid DET2 low borderline
Garb09G0000340 Steroid DET2 low borderline
Garb12G0003260 Steroid DET2 low borderline
Garb12G0024360 Steroid DET2 medium pass