PlantSME Plant secondary metabolism enzyme database

Oryza nivara (oryza_nivara)

Imported from atlas release summary for Oryza nivara.

2400
Candidate Protein Records
1919
Pathway-Level Records
5100
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 573 19 BAHD (237) View species results
Alkaloid pathway 445 24 7DLGT (78) View species results
Phenylpropanoid pathway 308 12 POD (101) View species results
Flavonoid pathway 306 13 UFGT (191) View species results
Rosmarinic acid pathway 150 7 C4H (77) View species results
Steroid pathway 137 13 SMT1/SMT2/SMT3 (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 401 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Protein/Isoform Record Pathway Family Confidence Status
ONIVA07G14020.1 Alkaloid 7DLGT medium pass
ONIVA07G14040.1 Alkaloid 7DLGT low borderline
ONIVA07G15370.1 Alkaloid 7DLGT low borderline
ONIVA07G15370.2 Alkaloid 7DLGT low borderline
ONIVA07G15370.3 Alkaloid 7DLGT low borderline
ONIVA07G15370.4 Alkaloid 7DLGT low borderline
ONIVA07G15370.5 Alkaloid 7DLGT low borderline
ONIVA07G15370.6 Alkaloid 7DLGT low borderline
ONIVA07G15660.1 Alkaloid 7DLGT low borderline
ONIVA07G17220.1 Alkaloid 7DLGT low borderline
ONIVA07G22080.1 Alkaloid 7DLGT medium pass
ONIVA07G24860.1 Alkaloid 7DLGT medium pass
ONIVA07G25600.1 Alkaloid 7DLGT low borderline
ONIVA08G08650.1 Alkaloid 7DLGT low borderline
ONIVA08G12010.1 Alkaloid 7DLGT low borderline
ONIVA08G14950.1 Alkaloid 7DLGT low borderline
ONIVA08G20750.1 Alkaloid 7DLGT medium pass
ONIVA08G20760.1 Alkaloid 7DLGT low borderline
ONIVA08G22090.1 Alkaloid 7DLGT medium pass
ONIVA08G22100.1 Alkaloid 7DLGT low borderline
ONIVA08G22110.1 Alkaloid 7DLGT low borderline
ONIVA08G22120.1 Alkaloid 7DLGT low borderline
ONIVA08G22130.1 Alkaloid 7DLGT low borderline
ONIVA09G01560.1 Alkaloid 7DLGT low borderline
ONIVA09G04030.1 Alkaloid 7DLGT low borderline
ONIVA09G04230.1 Alkaloid 7DLGT medium pass
ONIVA09G07180.1 Alkaloid 7DLGT low borderline
ONIVA09G14940.1 Alkaloid 7DLGT low borderline
ONIVA09G14950.1 Alkaloid 7DLGT low borderline
ONIVA09G14960.1 Alkaloid 7DLGT low borderline
ONIVA09G17630.1 Alkaloid 7DLGT low borderline
ONIVA09G17640.1 Alkaloid 7DLGT low borderline
ONIVA09G17640.2 Alkaloid 7DLGT low borderline
ONIVA09G17640.3 Alkaloid 7DLGT low borderline
ONIVA09G17640.4 Alkaloid 7DLGT low borderline
ONIVA09G17640.5 Alkaloid 7DLGT low borderline
ONIVA09G17640.6 Alkaloid 7DLGT low borderline
ONIVA10G03500.1 Alkaloid 7DLGT medium pass
ONIVA10G04410.1 Alkaloid 7DLGT low borderline
ONIVA10G05090.1 Alkaloid 7DLGT medium pass
ONIVA10G05420.1 Alkaloid 7DLGT low borderline
ONIVA10G05420.2 Alkaloid 7DLGT low borderline
ONIVA10G10640.1 Alkaloid 7DLGT medium pass
ONIVA10G17760.1 Alkaloid 7DLGT medium pass
ONIVA11G11740.1 Alkaloid 7DLGT medium pass
ONIVA11G11850.1 Alkaloid 7DLGT medium pass
ONIVA11G11920.1 Alkaloid 7DLGT medium pass
ONIVA11G12360.1 Alkaloid 7DLGT medium pass
ONIVA11G12480.1 Alkaloid 7DLGT low borderline
ONIVA11G18630.1 Alkaloid 7DLGT medium pass