PlantSME Plant secondary metabolism enzyme database

Oryza nivara (oryza_nivara)

Imported from atlas release summary for Oryza nivara.

1919
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 573 19 BAHD (237) View species results
Alkaloid pathway 445 24 7DLGT (78) View species results
Phenylpropanoid pathway 308 12 POD (101) View species results
Flavonoid pathway 306 13 UFGT (191) View species results
Rosmarinic acid pathway 150 7 C4H (77) View species results
Steroid pathway 137 13 SMT1/SMT2/SMT3 (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 401 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Gene Pathway Family Confidence Status
ONIVA05G20500.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA05G22030.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA06G02150.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA06G02150.2 Steroid BR6OX2/CYP85A2 low borderline
ONIVA06G07930.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA06G12760.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA06G14860.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA06G15520.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA06G17020.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA06G18770.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA06G18770.2 Steroid BR6OX2/CYP85A2 low borderline
ONIVA06G18990.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA06G19030.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA06G22530.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA06G22750.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA06G22770.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA06G24750.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA06G26300.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA06G26320.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA06G26330.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA06G26340.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA07G09350.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA07G10710.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA07G24010.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA08G00380.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA08G00390.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA08G00420.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA08G01870.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA08G02090.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA08G06300.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA08G08870.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA08G08950.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA08G19280.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA08G22430.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA08G22440.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA08G22470.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA08G22490.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA08G25690.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA09G03570.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA09G12130.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA09G12140.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA09G12140.2 Steroid BR6OX2/CYP85A2 low borderline
ONIVA09G12150.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA09G12160.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA09G13160.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA09G18350.2 Steroid BR6OX2/CYP85A2 low borderline
ONIVA09G19950.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA10G03680.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA10G03700.1 Steroid BR6OX2/CYP85A2 low borderline
ONIVA10G08890.1 Steroid BR6OX2/CYP85A2 low borderline