PlantSME Plant secondary metabolism enzyme database

Oryza nivara (oryza_nivara)

Imported from atlas release summary for Oryza nivara.

2400
Candidate Protein Records
1919
Pathway-Level Records
5100
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 573 19 BAHD (237) View species results
Alkaloid pathway 445 24 7DLGT (78) View species results
Phenylpropanoid pathway 308 12 POD (101) View species results
Flavonoid pathway 306 13 UFGT (191) View species results
Rosmarinic acid pathway 150 7 C4H (77) View species results
Steroid pathway 137 13 SMT1/SMT2/SMT3 (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 401 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C3'H/CYP98A
Reset
Protein/Isoform Record Pathway Family Confidence Status
ONIVA07G17380.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA07G19370.2 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA07G20090.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA07G24010.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA07G26210.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA08G00380.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA08G00400.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA08G00420.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA08G01960.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA08G02090.1 Phenylpropanoid C3'H/CYP98A medium pass
ONIVA08G06300.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA08G08870.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA08G08950.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA08G14240.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA08G14250.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA08G14550.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA08G16570.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA08G18790.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA08G19280.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA08G19890.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA08G22430.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA08G22440.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA08G22470.1 Phenylpropanoid C3'H/CYP98A high pass
ONIVA08G22490.1 Phenylpropanoid C3'H/CYP98A medium pass
ONIVA08G25690.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA08G25750.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA09G03570.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA09G05200.1 Phenylpropanoid C3'H/CYP98A high pass
ONIVA09G07550.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA09G09320.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA09G12130.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA09G12140.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA09G12140.2 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA09G12150.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA09G12160.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA09G13160.1 Phenylpropanoid C3'H/CYP98A medium pass
ONIVA09G18350.2 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA09G18350.3 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA09G18630.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA09G19940.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA09G19950.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA10G01810.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA10G03680.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA10G03700.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA10G04040.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA10G05010.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA10G07870.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA10G07870.2 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA10G08890.1 Phenylpropanoid C3'H/CYP98A medium pass
ONIVA10G10520.1 Phenylpropanoid C3'H/CYP98A medium borderline