PlantSME Plant secondary metabolism enzyme database

Oryza nivara (oryza_nivara)

Imported from atlas release summary for Oryza nivara.

2400
Candidate Protein Records
1919
Pathway-Level Records
5100
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 573 19 BAHD (237) View species results
Alkaloid pathway 445 24 7DLGT (78) View species results
Phenylpropanoid pathway 308 12 POD (101) View species results
Flavonoid pathway 306 13 UFGT (191) View species results
Rosmarinic acid pathway 150 7 C4H (77) View species results
Steroid pathway 137 13 SMT1/SMT2/SMT3 (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 401 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C3'H/CYP98A
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Protein/Isoform Record Pathway Family Confidence Status
ONIVA10G15210.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA10G17160.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA10G17160.2 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA10G17210.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA10G17220.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA10G17230.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA10G17240.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA10G17250.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA10G17790.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA10G17790.2 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA10G18230.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA10G18240.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA10G18800.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA10G19870.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA10G19870.2 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA10G19870.3 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA10G19870.4 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA10G19870.5 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA10G19870.6 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA10G21600.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA11G01290.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA11G01290.2 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA11G02540.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA11G02550.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA11G02550.2 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA11G02550.3 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA11G02720.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA11G02730.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA11G03030.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA11G03160.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA11G03170.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA11G03370.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA11G04800.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA11G04930.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA11G05040.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA11G09850.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA11G11140.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA11G11160.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA11G20640.2 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA11G20640.3 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA12G00710.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA12G00890.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA12G01510.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA12G01820.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA12G01960.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA12G02660.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA12G08550.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA12G10660.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA12G15520.1 Phenylpropanoid C3'H/CYP98A medium pass
ONIVA12G15530.1 Phenylpropanoid C3'H/CYP98A low borderline