PlantSME Plant secondary metabolism enzyme database

Oryza nivara (oryza_nivara)

Imported from atlas release summary for Oryza nivara.

1919
Family-Level Assignments
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Family-Level Assignments Families Top family Results
Terpenoid pathway 573 19 BAHD (237) View species results
Alkaloid pathway 445 24 7DLGT (78) View species results
Phenylpropanoid pathway 308 12 POD (101) View species results
Flavonoid pathway 306 13 UFGT (191) View species results
Rosmarinic acid pathway 150 7 C4H (77) View species results
Steroid pathway 137 13 SMT1/SMT2/SMT3 (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Family-level assignments Included families
P450/oxygenase 24 1977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 401 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
ONIVA01G09350.1 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
ONIVA01G09360.1 Terpenoid TPS medium pass TPS__00009__sp_A0A1C7AAN2_TPS10_TRIWF
ONIVA01G09360.2 Terpenoid TPS medium pass TPS__00009__sp_A0A1C7AAN2_TPS10_TRIWF
ONIVA01G16760.1 Terpenoid TPS medium pass TPS__00151__sp_Q1EG72_TPS11_MAIZE
ONIVA01G25590.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
ONIVA02G01560.1 Terpenoid TPS medium pass TPS__00153__sp_Q29VN2_TPS2_MAIZE
ONIVA02G17280.1 Terpenoid TPS medium pass TPS__00011__sp_A0A1D6LTV0_TPS26_MAIZE
ONIVA02G17280.2 Terpenoid TPS medium pass TPS__00011__sp_A0A1D6LTV0_TPS26_MAIZE
ONIVA02G17320.1 Terpenoid TPS medium pass TPS__00011__sp_A0A1D6LTV0_TPS26_MAIZE
ONIVA02G23310.1 Terpenoid TPS medium pass TPS__00167__sp_Q84ZW8_ACSS_MAIZE
ONIVA02G23410.1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
ONIVA02G23460.1 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
ONIVA02G23470.1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
ONIVA02G23470.2 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
ONIVA02G23470.3 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
ONIVA02G23500.1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
ONIVA02G23500.2 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
ONIVA02G23550.1 Terpenoid TPS medium pass TPS__00167__sp_Q84ZW8_ACSS_MAIZE
ONIVA03G18300.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
ONIVA03G18310.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
ONIVA03G19040.1 Terpenoid TPS medium pass TPS__00010__sp_A0A1D6EFT8_EDSB_MAIZE
ONIVA03G19050.1 Terpenoid TPS medium pass TPS__00010__sp_A0A1D6EFT8_EDSB_MAIZE
ONIVA03G19060.1 Terpenoid TPS medium pass TPS__00032__sp_A0A291LSD6_TPS21_MAIZE
ONIVA03G19070.1 Terpenoid TPS medium pass TPS__00010__sp_A0A1D6EFT8_EDSB_MAIZE
ONIVA03G19210.1 Terpenoid TPS medium pass TPS__00010__sp_A0A1D6EFT8_EDSB_MAIZE
ONIVA03G19230.1 Terpenoid TPS medium pass TPS__00010__sp_A0A1D6EFT8_EDSB_MAIZE
ONIVA04G00430.1 Terpenoid TPS medium pass TPS__00051__sp_A0A7G5KLV1_TPS2_CANOD
ONIVA04G02320.1 Terpenoid TPS medium pass TPS__00009__sp_A0A1C7AAN2_TPS10_TRIWF
ONIVA04G02320.2 Terpenoid TPS medium pass TPS__00009__sp_A0A1C7AAN2_TPS10_TRIWF
ONIVA04G02320.3 Terpenoid TPS medium pass TPS__00009__sp_A0A1C7AAN2_TPS10_TRIWF
ONIVA04G03610.1 Terpenoid TPS medium pass TPS__00011__sp_A0A1D6LTV0_TPS26_MAIZE
ONIVA04G06530.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
ONIVA04G06550.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
ONIVA04G06560.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
ONIVA04G06590.1 Terpenoid TPS medium pass TPS__00154__sp_Q29VN3_TPS8_MAIZE
ONIVA04G06610.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
ONIVA04G06620.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
ONIVA04G06640.1 Terpenoid TPS low borderline TPS__00159__sp_Q5GJ59_TPS7_MAIZE
ONIVA04G06640.2 Terpenoid TPS low borderline TPS__00159__sp_Q5GJ59_TPS7_MAIZE
ONIVA04G06640.3 Terpenoid TPS low borderline TPS__00159__sp_Q5GJ59_TPS7_MAIZE
ONIVA04G06640.4 Terpenoid TPS low borderline TPS__00159__sp_Q5GJ59_TPS7_MAIZE
ONIVA04G06640.5 Terpenoid TPS low borderline TPS__00159__sp_Q5GJ59_TPS7_MAIZE
ONIVA04G06640.6 Terpenoid TPS low borderline TPS__00159__sp_Q5GJ59_TPS7_MAIZE
ONIVA04G24100.1 Terpenoid TPS low borderline TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
ONIVA05G03790.1 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
ONIVA05G03790.2 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
ONIVA05G11340.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
ONIVA05G11340.2 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
ONIVA05G11340.3 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
ONIVA05G11340.4 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE