PlantSME Plant secondary metabolism enzyme database

Oryza nivara (oryza_nivara)

Imported from atlas release summary for Oryza nivara.

1919
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 573 19 BAHD (237) View species results
Alkaloid pathway 445 24 7DLGT (78) View species results
Phenylpropanoid pathway 308 12 POD (101) View species results
Flavonoid pathway 306 13 UFGT (191) View species results
Rosmarinic acid pathway 150 7 C4H (77) View species results
Steroid pathway 137 13 SMT1/SMT2/SMT3 (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 401 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
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Gene Pathway Family Confidence Status Best Target
ONIVA07G07350.1 Terpenoid UGT medium pass UGT__00116__sp_U3UA11_UGT7_CATRO
ONIVA07G07990.1 Terpenoid UGT medium pass UGT__00115__sp_U3U992_UGT8_CATRO
ONIVA07G13240.1 Terpenoid UGT medium pass UGT__00115__sp_U3U992_UGT8_CATRO
ONIVA07G13270.1 Terpenoid UGT medium pass UGT__00117__sp_U5NH37_7DLGT_CATRO
ONIVA07G13290.1 Terpenoid UGT medium pass UGT__00115__sp_U3U992_UGT8_CATRO
ONIVA07G13980.1 Terpenoid UGT medium pass UGT__00020__sp_A3BK75_UGT83_ORYSJ
ONIVA07G14000.1 Terpenoid UGT medium pass UGT__00020__sp_A3BK75_UGT83_ORYSJ
ONIVA07G14010.1 Terpenoid UGT medium pass UGT__00020__sp_A3BK75_UGT83_ORYSJ
ONIVA07G14020.1 Terpenoid UGT medium pass UGT__00020__sp_A3BK75_UGT83_ORYSJ
ONIVA07G14040.1 Terpenoid UGT medium pass UGT__00020__sp_A3BK75_UGT83_ORYSJ
ONIVA07G14050.1 Terpenoid UGT medium pass UGT__00020__sp_A3BK75_UGT83_ORYSJ
ONIVA07G15370.1 Terpenoid UGT low borderline UGT__00020__sp_A3BK75_UGT83_ORYSJ
ONIVA07G15370.2 Terpenoid UGT low borderline UGT__00020__sp_A3BK75_UGT83_ORYSJ
ONIVA07G15370.3 Terpenoid UGT medium pass UGT__00020__sp_A3BK75_UGT83_ORYSJ
ONIVA07G15370.4 Terpenoid UGT low borderline UGT__00020__sp_A3BK75_UGT83_ORYSJ
ONIVA07G15370.5 Terpenoid UGT medium pass UGT__00020__sp_A3BK75_UGT83_ORYSJ
ONIVA07G15370.6 Terpenoid UGT medium pass UGT__00020__sp_A3BK75_UGT83_ORYSJ
ONIVA07G17220.1 Terpenoid UGT medium pass UGT__00020__sp_A3BK75_UGT83_ORYSJ
ONIVA07G22080.1 Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
ONIVA07G24860.1 Terpenoid UGT medium pass UGT__00020__sp_A3BK75_UGT83_ORYSJ
ONIVA07G25600.1 Terpenoid UGT medium pass UGT__00064__sp_P0DO71_GT941_SIRGR
ONIVA07G26220.1 Terpenoid UGT low borderline UGT__00002__sp_A0A067YBQ3_UGT13_PUEML
ONIVA08G07990.1 Terpenoid UGT low borderline UGT__00022__sp_B2XBQ5_85A19_PRUDU
ONIVA08G08650.1 Terpenoid UGT medium pass UGT__00086__sp_Q9LFJ8_U78D2_ARATH
ONIVA08G12010.1 Terpenoid UGT low borderline UGT__00051__sp_O23382_U71B5_ARATH
ONIVA08G14950.1 Terpenoid UGT medium pass UGT__00037__sp_I1LCI8_FG2KO_SOYBN
ONIVA08G20750.1 Terpenoid UGT medium pass UGT__00082__sp_Q9C9B0_U89B1_ARATH
ONIVA08G20760.1 Terpenoid UGT medium pass UGT__00082__sp_Q9C9B0_U89B1_ARATH
ONIVA08G22070.1 Terpenoid UGT medium pass UGT__00092__sp_Q9LNI1_U72B3_ARATH
ONIVA08G22090.1 Terpenoid UGT medium pass UGT__00030__sp_D3UAG3_U88F2_PYRCO
ONIVA08G22100.1 Terpenoid UGT medium pass UGT__00030__sp_D3UAG3_U88F2_PYRCO
ONIVA08G22110.1 Terpenoid UGT medium pass UGT__00002__sp_A0A067YBQ3_UGT13_PUEML
ONIVA08G22120.1 Terpenoid UGT medium pass UGT__00088__sp_Q9LK73_U88A1_ARATH
ONIVA08G22130.1 Terpenoid UGT medium pass UGT__00088__sp_Q9LK73_U88A1_ARATH
ONIVA09G04030.1 Terpenoid UGT medium pass UGT__00084__sp_Q9FI99_U76C1_ARATH
ONIVA09G04230.1 Terpenoid UGT medium pass UGT__00025__sp_C3W7B0_CGT_ORYSI
ONIVA09G07180.1 Terpenoid UGT low borderline UGT__00025__sp_C3W7B0_CGT_ORYSI
ONIVA09G14940.1 Terpenoid UGT medium pass UGT__00002__sp_A0A067YBQ3_UGT13_PUEML
ONIVA09G14950.1 Terpenoid UGT medium pass UGT__00001__sp_A0A067YB04_UGT1_PUEML
ONIVA09G14960.1 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
ONIVA09G17630.1 Terpenoid UGT medium pass UGT__00074__sp_Q7XT97_UGT79_ORYSJ
ONIVA09G17640.1 Terpenoid UGT medium pass UGT__00074__sp_Q7XT97_UGT79_ORYSJ
ONIVA09G17640.2 Terpenoid UGT medium pass UGT__00074__sp_Q7XT97_UGT79_ORYSJ
ONIVA09G17640.3 Terpenoid UGT low borderline UGT__00074__sp_Q7XT97_UGT79_ORYSJ
ONIVA09G17640.4 Terpenoid UGT low borderline UGT__00074__sp_Q7XT97_UGT79_ORYSJ
ONIVA09G17640.5 Terpenoid UGT low borderline UGT__00074__sp_Q7XT97_UGT79_ORYSJ
ONIVA09G17640.6 Terpenoid UGT medium pass UGT__00074__sp_Q7XT97_UGT79_ORYSJ
ONIVA10G03500.1 Terpenoid UGT medium pass UGT__00030__sp_D3UAG3_U88F2_PYRCO
ONIVA10G04410.1 Terpenoid UGT low borderline UGT__00082__sp_Q9C9B0_U89B1_ARATH
ONIVA10G05090.1 Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA