PlantSME Plant secondary metabolism enzyme database

Oryza nivara (oryza_nivara)

Imported from atlas release summary for Oryza nivara.

2400
Candidate Protein Records
1919
Pathway-Level Records
5100
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 573 19 BAHD (237) View species results
Alkaloid pathway 445 24 7DLGT (78) View species results
Phenylpropanoid pathway 308 12 POD (101) View species results
Flavonoid pathway 306 13 UFGT (191) View species results
Rosmarinic acid pathway 150 7 C4H (77) View species results
Steroid pathway 137 13 SMT1/SMT2/SMT3 (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 401 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status Best Target
ONIVA08G00420.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
ONIVA08G01960.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
ONIVA08G26450.1 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
ONIVA08G26610.1 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
ONIVA09G03570.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
ONIVA09G05200.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
ONIVA09G18350.2 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
ONIVA09G18350.3 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
ONIVA09G18970.1 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
ONIVA10G02450.1 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
ONIVA10G03020.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
ONIVA10G10510.1 Terpenoid CYP71 low borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
ONIVA10G10520.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
ONIVA10G18800.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
ONIVA11G03030.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
ONIVA11G03030.2 Terpenoid CYP71 low borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
ONIVA11G04800.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
ONIVA11G11140.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
ONIVA11G20640.1 Terpenoid CYP71 low borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
ONIVA11G20640.3 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
ONIVA12G18900.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
ONIVA01G00040.1 Terpenoid CYP76 low borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
ONIVA01G06140.1 Terpenoid CYP76 low borderline CYP76__00024__sp_W0FKI0_DOX1_PERHD
ONIVA01G10280.1 Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
ONIVA01G10290.1 Terpenoid CYP76 medium borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
ONIVA01G10310.1 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
ONIVA01G10320.2 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
ONIVA01G10320.3 Terpenoid CYP76 medium borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
ONIVA01G21800.1 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
ONIVA01G22330.1 Terpenoid CYP76 medium pass CYP76__00018__sp_Q69X58_C76M7_ORYSJ
ONIVA01G31760.1 Terpenoid CYP76 low borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
ONIVA01G31770.1 Terpenoid CYP76 low borderline CYP76__00021__sp_Q6Z5I7_C76M6_ORYSJ
ONIVA01G31770.2 Terpenoid CYP76 low borderline CYP76__00021__sp_Q6Z5I7_C76M6_ORYSJ
ONIVA01G40290.1 Terpenoid CYP76 low borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
ONIVA02G00730.1 Terpenoid CYP76 low borderline CYP76__00020__sp_Q6YTF5_C76M5_ORYSJ
ONIVA02G03530.1 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
ONIVA02G09990.1 Terpenoid CYP76 low borderline CYP76__00005__sp_A0A125QZE2_C76K1_SALMI
ONIVA02G14400.1 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
ONIVA02G15760.1 Terpenoid CYP76 low borderline CYP76__00020__sp_Q6YTF5_C76M5_ORYSJ
ONIVA02G18910.1 Terpenoid CYP76 medium pass CYP76__00013__sp_D1MI46_C76BA_SWEMU
ONIVA02G19050.1 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
ONIVA02G19050.3 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
ONIVA02G19050.4 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
ONIVA02G19110.1 Terpenoid CYP76 low borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
ONIVA02G19110.2 Terpenoid CYP76 low borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
ONIVA02G19110.3 Terpenoid CYP76 medium pass CYP76__00013__sp_D1MI46_C76BA_SWEMU
ONIVA02G23330.1 Terpenoid CYP76 medium borderline CYP76__00020__sp_Q6YTF5_C76M5_ORYSJ
ONIVA02G23370.1 Terpenoid CYP76 medium borderline CYP76__00019__sp_Q6YTF1_C76M8_ORYSJ
ONIVA02G23400.1 Terpenoid CYP76 medium borderline CYP76__00018__sp_Q69X58_C76M7_ORYSJ
ONIVA02G23540.1 Terpenoid CYP76 medium borderline CYP76__00021__sp_Q6Z5I7_C76M6_ORYSJ