PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status Best Target
Pnig01G0009470 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0009490 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0009520 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0009540 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0009560 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0009610 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0009630 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0009680 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0009710 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0009730 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0009810 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0009860 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0009880 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0009940 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0009970 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0009990 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0010010 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0010030 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0010060 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0010070 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0010080 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0010140 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0010150 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0010170 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0010190 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0010200 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0010250 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0010270 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0010290 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0011290 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0011320 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0011340 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0013740 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0022400 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig01G0022560 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig02G0000280 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig02G0000560 Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig02G0009070 Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig02G0023130 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig02G0037780 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig02G0037870 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig02G0038320 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig02G0038410 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig02G0038680 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig02G0038800 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig02G0038970 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig03G0018040 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig03G0031690 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig04G0005040 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig04G0005050 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA