PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status Best Target
Pnig04G0005620 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig04G0005640 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig04G0006640 Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig04G0007730 Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig04G0008370 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig04G0008400 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig04G0008420 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig04G0008480 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig04G0008520 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig04G0008560 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig04G0009170 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig04G0009190 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig05G0022840 Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig05G0032820 Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig06G0001780 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig06G0002540 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig06G0002560 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig06G0012720 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig07G0027560 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig07G0027650 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig07G0027670 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig07G0027690 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig07G0027730 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig07G0027750 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig07G0027780 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig07G0027860 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig07G0027880 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig07G0027910 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig07G0027950 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig08G0013750 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig08G0013900 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig08G0013960 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig08G0013980 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig08G0014160 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig08G0015820 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Pnig09G0007540 Steroid CAS medium pass CAS__00012__sp_Q9FN48_CAS_ARATH
Pnig09G0022070 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig09G0022080 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig09G0022110 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig09G0022120 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig09G0022130 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig09G0022140 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig09G0022150 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig09G0022170 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig09G0022180 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig09G0022210 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig09G0022220 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig09G0022250 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig09G0022260 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Pnig09G0022290 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA