PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status Best Target
Pnig03G0009510 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig03G0009520 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig03G0009540 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig03G0009550 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig03G0016750 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig03G0019930 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig03G0023840 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig04G0015880 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig04G0015900 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig04G0023280 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig04G0027110 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig04G0027120 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig04G0027250 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig04G0027260 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig04G0027290 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig04G0027310 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig04G0027320 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig04G0027330 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig05G0010930 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig05G0022620 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig05G0027050 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig05G0033280 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig06G0012860 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig06G0012870 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig06G0012960 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig06G0012980 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig06G0019130 Alkaloid 7DLGT low borderline 7DLGT__00002__sp_U5NH37_7DLGT_CATRO
Pnig06G0019160 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig06G0019170 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig06G0019180 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig07G0005860 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig07G0010050 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig07G0010870 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig07G0011730 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig07G0012120 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig07G0031210 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig07G0031250 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig08G0014940 Alkaloid 7DLGT low borderline 7DLGT__00002__sp_U5NH37_7DLGT_CATRO
Pnig08G0014950 Alkaloid 7DLGT low borderline 7DLGT__00002__sp_U5NH37_7DLGT_CATRO
Pnig08G0015120 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig08G0015170 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig08G0015180 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig08G0015370 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig08G0016210 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig08G0016270 Alkaloid 7DLGT low borderline 7DLGT__00002__sp_U5NH37_7DLGT_CATRO
Pnig08G0022680 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig08G0025810 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig08G0025890 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig09G0008250 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig09G0008300 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO