PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status Best Target
Pnig09G0021680 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig09G0021720 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig09G0021740 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig09G0021760 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig09G0021770 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig09G0021860 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig09G0021870 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig10G0011060 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig10G0012320 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig10G0012350 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig10G0012360 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig10G0012380 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig10G0016900 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig10G0016930 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig10G0016950 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig11G0004540 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig11G0007170 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig11G0009220 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig11G0009230 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig11G0012680 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig11G0013730 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig11G0013740 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig11G0013780 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig11G0013790 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig12G0008620 Alkaloid 7DLGT low borderline 7DLGT__00002__sp_U5NH37_7DLGT_CATRO
Pnig12G0010490 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig12G0010570 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig12G0010640 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig12G0011700 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig12G0011720 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig12G0011770 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig12G0014010 Alkaloid 7DLGT low borderline 7DLGT__00002__sp_U5NH37_7DLGT_CATRO
Pnig13G0005590 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig13G0005640 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig13G0005670 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig13G0005700 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig13G0006150 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig13G0006160 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig13G0006170 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig13G0008530 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig13G0008550 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig13G0021840 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig15G0001620 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig15G0016270 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig15G0016540 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig15G0019700 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig15G0019740 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig16G0001080 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig16G0005000 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig17G0000100 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO