PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status Best Target
Pnig17G0000140 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig17G0000180 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig17G0000200 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig17G0000250 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig17G0000260 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig17G0000290 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig17G0000300 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig17G0000350 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig17G0000410 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig17G0000420 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig17G0000500 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig17G0000540 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig17G0000570 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig17G0000580 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig17G0000630 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig18G0011950 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig18G0011960 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig18G0014040 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig21G0014680 Alkaloid 7DLGT low borderline 7DLGT__00002__sp_U5NH37_7DLGT_CATRO
Pnig21G0015470 Alkaloid 7DLGT low borderline 7DLGT__00002__sp_U5NH37_7DLGT_CATRO
Pnig24G0001510 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig24G0002070 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig24G0004180 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig24G0004200 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig24G0004230 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig24G0004270 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig24G0004290 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig24G0004310 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig24G0004320 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig24G0004340 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig24G0004360 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig24G0004370 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig24G0004380 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig24G0006320 Alkaloid 7DLGT medium pass 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig26G0004820 Alkaloid 7DLGT low borderline 7DLGT__00001__sp_U3U992_UGT8_CATRO
Pnig01G0006560 Alkaloid 7DLH low borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig02G0011520 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig03G0010410 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig05G0015320 Alkaloid 7DLH low borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig05G0029390 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig05G0029430 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig05G0029690 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig05G0029760 Alkaloid 7DLH medium pass 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig05G0032700 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig05G0032720 Alkaloid 7DLH medium pass 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig05G0032800 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig06G0014680 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig06G0014710 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig06G0014740 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Pnig07G0015980 Alkaloid 7DLH low borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO