PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2984
Candidate Protein Records
2845
Pathway-Level Records
5474
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Pnig11G0013460 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig11G0013490 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig12G0004040 Phenylpropanoid C3'H/CYP98A low borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig12G0004050 Phenylpropanoid C3'H/CYP98A low borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig12G0004070 Phenylpropanoid C3'H/CYP98A low borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig12G0004080 Phenylpropanoid C3'H/CYP98A medium pass C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig12G0004120 Phenylpropanoid C3'H/CYP98A low borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig12G0011290 Phenylpropanoid C3'H/CYP98A low borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig12G0011360 Phenylpropanoid C3'H/CYP98A low borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig12G0011370 Phenylpropanoid C3'H/CYP98A low borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig12G0011390 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig13G0002960 Phenylpropanoid C3'H/CYP98A low borderline C3H_CYP98A__00002__sp_Q9CA60_C98A9_ARATH
Pnig13G0004040 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig13G0007720 Phenylpropanoid C3'H/CYP98A low borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig13G0015360 Phenylpropanoid C3'H/CYP98A medium pass C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig13G0016820 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00002__sp_Q9CA60_C98A9_ARATH
Pnig14G0011510 Phenylpropanoid C3'H/CYP98A low borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig15G0006120 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig15G0006420 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig16G0004270 Phenylpropanoid C3'H/CYP98A low borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig16G0005190 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig16G0009420 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig16G0020200 Phenylpropanoid C3'H/CYP98A low borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig17G0001340 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig17G0001350 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00003__sp_Q9CA61_C98A8_ARATH
Pnig17G0001360 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig17G0001390 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig17G0001410 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig17G0005200 Phenylpropanoid C3'H/CYP98A low borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig17G0005900 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00003__sp_Q9CA61_C98A8_ARATH
Pnig17G0014790 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig17G0017090 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig19G0003420 Phenylpropanoid C3'H/CYP98A medium pass C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig19G0007610 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig19G0008670 Phenylpropanoid C3'H/CYP98A medium pass C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig19G0009170 Phenylpropanoid C3'H/CYP98A low borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig19G0009190 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig19G0009210 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig19G0009250 Phenylpropanoid C3'H/CYP98A low borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig19G0009280 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig19G0015190 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig19G0015230 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig19G0015290 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig19G0015300 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig20G0004740 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig20G0006320 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig20G0006330 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig20G0018090 Phenylpropanoid C3'H/CYP98A low borderline C3H_CYP98A__00002__sp_Q9CA60_C98A9_ARATH
Pnig21G0006840 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig21G0006850 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH