PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2984
Candidate Protein Records
2845
Pathway-Level Records
5474
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Pnig21G0006890 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig21G0006930 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig22G0009260 Phenylpropanoid C3'H/CYP98A low borderline C3H_CYP98A__00001__sp_O22203_C98A3_ARATH
Pnig23G0010430 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00002__sp_Q9CA60_C98A9_ARATH
Pnig24G0004890 Phenylpropanoid C3'H/CYP98A low borderline C3H_CYP98A__00003__sp_Q9CA61_C98A8_ARATH
Pnig25G0010470 Phenylpropanoid C3'H/CYP98A low borderline C3H_CYP98A__00003__sp_Q9CA61_C98A8_ARATH
PnigPn410000020 Phenylpropanoid C3'H/CYP98A medium borderline C3H_CYP98A__00003__sp_Q9CA61_C98A8_ARATH
Pnig02G0008930 Phenylpropanoid C4H/CYP73A low borderline C4H_CYP73A__00001__sp_Q94IP1_TCMO_SORBI
Pnig04G0010760 Phenylpropanoid C4H/CYP73A medium borderline C4H_CYP73A__00001__sp_Q94IP1_TCMO_SORBI
Pnig05G0028960 Phenylpropanoid C4H/CYP73A low borderline C4H_CYP73A__00001__sp_Q94IP1_TCMO_SORBI
Pnig09G0023090 Phenylpropanoid C4H/CYP73A medium pass C4H_CYP73A__00001__sp_Q94IP1_TCMO_SORBI
Pnig09G0023100 Phenylpropanoid C4H/CYP73A medium pass C4H_CYP73A__00001__sp_Q94IP1_TCMO_SORBI
Pnig11G0013180 Phenylpropanoid C4H/CYP73A medium borderline C4H_CYP73A__00001__sp_Q94IP1_TCMO_SORBI
Pnig11G0013230 Phenylpropanoid C4H/CYP73A low borderline C4H_CYP73A__00001__sp_Q94IP1_TCMO_SORBI
Pnig12G0011380 Phenylpropanoid C4H/CYP73A medium pass C4H_CYP73A__00001__sp_Q94IP1_TCMO_SORBI
Pnig15G0023170 Phenylpropanoid C4H/CYP73A low borderline C4H_CYP73A__00001__sp_Q94IP1_TCMO_SORBI
Pnig15G0025190 Phenylpropanoid C4H/CYP73A low borderline C4H_CYP73A__00001__sp_Q94IP1_TCMO_SORBI
Pnig18G0000350 Phenylpropanoid C4H/CYP73A medium borderline C4H_CYP73A__00001__sp_Q94IP1_TCMO_SORBI
Pnig18G0000360 Phenylpropanoid C4H/CYP73A medium borderline C4H_CYP73A__00001__sp_Q94IP1_TCMO_SORBI
Pnig23G0005580 Phenylpropanoid C4H/CYP73A medium borderline C4H_CYP73A__00001__sp_Q94IP1_TCMO_SORBI
Pnig01G0002820 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0002990 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0006490 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0009160 Phenylpropanoid CAD low borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Pnig01G0009380 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0009390 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0009470 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0009490 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0009510 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0009540 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0009580 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0009630 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0009680 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0009710 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0009730 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0009810 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0009830 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0009860 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0009880 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0009940 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0010010 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0010030 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0010060 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0010070 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0010080 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0010140 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0010150 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0010170 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0010190 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pnig01G0010200 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM