PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status Best Target
Pnig09G0022640 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig09G0022660 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig09G0022710 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig09G0022730 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig09G0022770 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig09G0022780 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig09G0022830 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig09G0022860 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig09G0023000 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig09G0023020 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig09G0023040 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig09G0023050 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig09G0023070 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig09G0023090 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig09G0023100 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig09G0023110 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig09G0024120 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig10G0016440 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig10G0016470 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig10G0016520 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig11G0006450 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig11G0013180 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig11G0013190 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig11G0013210 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig11G0013230 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig11G0013240 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig11G0013440 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig11G0013460 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig11G0013490 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig12G0004040 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig12G0004050 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig12G0004070 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig12G0004080 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig12G0004120 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig12G0011290 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig12G0011360 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig12G0011370 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig12G0011380 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig12G0011390 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig13G0002960 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig13G0004040 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig13G0007720 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig13G0015360 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig13G0016820 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig14G0010120 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig14G0010130 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig15G0003700 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig15G0004370 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig15G0006120 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig15G0006420 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI