PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status Best Target
Pnig02G0001700 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig02G0005360 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig02G0008930 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig02G0009520 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig02G0011790 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig02G0012630 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig02G0015950 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig02G0021950 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig02G0022610 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig02G0022830 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig02G0030510 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig03G0004360 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig03G0006020 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig03G0006280 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig03G0012390 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig03G0012400 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig03G0019690 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig03G0019700 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig03G0023590 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig03G0023600 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig03G0024070 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig03G0024080 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig03G0024130 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig03G0024450 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig03G0029790 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig04G0010760 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig04G0024350 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig04G0026360 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig04G0026370 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig04G0026380 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig05G0013230 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig05G0013640 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig05G0016260 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig05G0028950 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig05G0028960 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig05G0032290 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig05G0033260 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig05G0033380 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig05G0033420 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig06G0017250 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig06G0019900 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig07G0017390 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig07G0029080 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig07G0031330 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig08G0002100 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig08G0002460 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig08G0010030 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig08G0017140 Rosmarinic Acid C4H low borderline C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig08G0017270 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI
Pnig09G0022630 Rosmarinic Acid C4H medium pass C4H__00001__sp_Q94IP1_TCMO_SORBI