PlantSME Plant secondary metabolism enzyme database

Piper nigrum (piper_nigrum)

Imported from atlas release summary for Piper nigrum.

2845
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 924 18 TPS (287) View species results
Alkaloid pathway 700 30 GES (204) View species results
Phenylpropanoid pathway 568 13 POD (198) View species results
Flavonoid pathway 255 13 UFGT (67) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 149 13 CAS (74) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1538 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 411 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status Best Target
Pnig08G0018690 Rosmarinic Acid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Pnig09G0017100 Rosmarinic Acid PAL medium pass PAL__00005__sp_Q50EX7_PAL1_PETHY
Pnig16G0016200 Rosmarinic Acid PAL medium pass PAL__00003__sp_P45724_PAL2_ARATH
Pnig16G0016270 Rosmarinic Acid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Pnig18G0009670 Rosmarinic Acid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Pnig18G0016050 Rosmarinic Acid PAL medium pass PAL__00005__sp_Q50EX7_PAL1_PETHY
Pnig22G0006320 Rosmarinic Acid PAL low borderline PAL__00009__sp_Q9SS45_PAL4_ARATH
Pnig23G0009880 Rosmarinic Acid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
Pnig23G0011160 Rosmarinic Acid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
Pnig23G0014900 Rosmarinic Acid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Pnig01G0015620 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig01G0015630 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig01G0015670 Rosmarinic Acid RAS low borderline RAS__00002__sp_G0LD36_RAS_MELOI
Pnig02G0007720 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig02G0008160 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig02G0016870 Rosmarinic Acid RAS low borderline RAS__00001__sp_A0PDV5_RAS_PLESU
Pnig03G0034590 Rosmarinic Acid RAS low borderline RAS__00002__sp_G0LD36_RAS_MELOI
Pnig04G0016800 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig04G0017110 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig05G0014290 Rosmarinic Acid RAS medium pass RAS__00001__sp_A0PDV5_RAS_PLESU
Pnig05G0014300 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig05G0014320 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig05G0022720 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig05G0022760 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig05G0022820 Rosmarinic Acid RAS low borderline RAS__00002__sp_G0LD36_RAS_MELOI
Pnig05G0022830 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig05G0022850 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig05G0022880 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig05G0022930 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig05G0029090 Rosmarinic Acid RAS low borderline RAS__00002__sp_G0LD36_RAS_MELOI
Pnig05G0032400 Rosmarinic Acid RAS low borderline RAS__00002__sp_G0LD36_RAS_MELOI
Pnig07G0004770 Rosmarinic Acid RAS low borderline RAS__00002__sp_G0LD36_RAS_MELOI
Pnig07G0023530 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig07G0023540 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig07G0023550 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig07G0033210 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig09G0011700 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig09G0020800 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig09G0021150 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig11G0001610 Rosmarinic Acid RAS medium pass RAS__00001__sp_A0PDV5_RAS_PLESU
Pnig11G0001720 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig11G0005990 Rosmarinic Acid RAS low borderline RAS__00001__sp_A0PDV5_RAS_PLESU
Pnig12G0008550 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig14G0005070 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig14G0005080 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig14G0005100 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig14G0005120 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig14G0005130 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig14G0005150 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI
Pnig14G0005170 Rosmarinic Acid RAS medium pass RAS__00002__sp_G0LD36_RAS_MELOI