PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Potra001534g12735.3 Rosmarinic Acid RAS medium pass
Potra001735g14136.4 Rosmarinic Acid RAS low borderline
Potra001771g14391.1 Rosmarinic Acid RAS low borderline
Potra002053g16020.1 Rosmarinic Acid RAS low borderline
Potra002433g18465.1 Rosmarinic Acid RAS low borderline
Potra002576g19378.1 Rosmarinic Acid RAS low borderline
Potra003138g20827.1 Rosmarinic Acid RAS low borderline
Potra003213g21015.1 Rosmarinic Acid RAS low borderline
Potra003606g22161.1 Rosmarinic Acid RAS low borderline
Potra003606g22161.2 Rosmarinic Acid RAS low borderline
Potra003606g22161.3 Rosmarinic Acid RAS low borderline
Potra003606g22161.4 Rosmarinic Acid RAS low borderline
Potra003606g22161.5 Rosmarinic Acid RAS low borderline
Potra003606g22161.6 Rosmarinic Acid RAS low borderline
Potra003606g22161.7 Rosmarinic Acid RAS low borderline
Potra003736g22631.1 Rosmarinic Acid RAS low borderline
Potra003736g22631.2 Rosmarinic Acid RAS low borderline
Potra003736g22631.3 Rosmarinic Acid RAS low borderline
Potra003736g22631.4 Rosmarinic Acid RAS low borderline
Potra003736g22631.5 Rosmarinic Acid RAS low borderline
Potra003895g23390.1 Rosmarinic Acid RAS low borderline
Potra003935g23620.1 Rosmarinic Acid RAS medium pass
Potra003935g23621.1 Rosmarinic Acid RAS medium pass
Potra008951g26262.1 Rosmarinic Acid RAS medium pass
Potra009806g26435.1 Rosmarinic Acid RAS low borderline
Potra164186g27154.1 Rosmarinic Acid RAS medium pass
Potra172882g27612.1 Rosmarinic Acid RAS medium pass
Potra175570g27810.1 Rosmarinic Acid RAS medium pass
Potra180861g28125.1 Rosmarinic Acid RAS medium pass
Potra181392g28153.1 Rosmarinic Acid RAS medium pass
Potra189010g28652.4 Rosmarinic Acid RAS low borderline
Potra189010g28652.5 Rosmarinic Acid RAS low borderline
Potra198690g29344.1 Rosmarinic Acid RAS medium pass
Potra000418g02135.1 Rosmarinic Acid TAT medium pass
Potra000418g02135.2 Rosmarinic Acid TAT medium pass
Potra000418g02135.3 Rosmarinic Acid TAT medium pass
Potra000418g02136.1 Rosmarinic Acid TAT medium pass
Potra000418g02136.2 Rosmarinic Acid TAT medium pass
Potra000418g02136.3 Rosmarinic Acid TAT medium pass
Potra000418g02136.4 Rosmarinic Acid TAT medium pass
Potra000418g02136.5 Rosmarinic Acid TAT medium pass
Potra000418g02136.6 Rosmarinic Acid TAT medium pass
Potra000418g02136.7 Rosmarinic Acid TAT medium pass
Potra000419g02170.1 Rosmarinic Acid TAT low borderline
Potra000419g02170.2 Rosmarinic Acid TAT low borderline
Potra000419g02170.3 Rosmarinic Acid TAT low borderline
Potra000426g02246.1 Rosmarinic Acid TAT low borderline
Potra000445g02484.1 Rosmarinic Acid TAT medium pass
Potra000687g05337.1 Rosmarinic Acid TAT low borderline
Potra000712g05571.1 Rosmarinic Acid TAT medium pass