PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Potra003884g23327.4 Rosmarinic Acid CPR medium pass
Potra003884g23327.5 Rosmarinic Acid CPR medium pass
Potra000524g03566.1 Rosmarinic Acid HPPR medium pass
Potra000524g03566.2 Rosmarinic Acid HPPR medium pass
Potra001269g10962.1 Rosmarinic Acid HPPR medium pass
Potra001269g10962.2 Rosmarinic Acid HPPR medium pass
Potra001269g10962.3 Rosmarinic Acid HPPR medium pass
Potra001269g10962.4 Rosmarinic Acid HPPR medium pass
Potra001507g12575.1 Rosmarinic Acid HPPR medium pass
Potra001507g12576.1 Rosmarinic Acid HPPR medium pass
Potra001727g14057.1 Rosmarinic Acid HPPR medium pass
Potra002099g16324.1 Rosmarinic Acid HPPR medium pass
Potra002099g16324.2 Rosmarinic Acid HPPR medium pass
Potra003688g22445.1 Rosmarinic Acid HPPR medium pass
Potra000611g04646.1 Rosmarinic Acid PAL medium pass
Potra007760g26019.1 Rosmarinic Acid PAL high pass
Potra008798g26230.1 Rosmarinic Acid PAL medium pass
Potra008798g26230.2 Rosmarinic Acid PAL medium pass
Potra010140g26499.1 Rosmarinic Acid PAL high pass
Potra010140g26499.2 Rosmarinic Acid PAL high pass
Potra174349g27713.1 Rosmarinic Acid PAL high pass
Potra189403g28680.1 Rosmarinic Acid PAL medium pass
Potra000178g00684.1 Rosmarinic Acid RAS medium pass
Potra000178g00684.2 Rosmarinic Acid RAS medium pass
Potra000178g00684.3 Rosmarinic Acid RAS medium pass
Potra000178g00684.4 Rosmarinic Acid RAS medium pass
Potra000235g00937.1 Rosmarinic Acid RAS medium pass
Potra000359g01452.1 Rosmarinic Acid RAS medium pass
Potra000408g01988.1 Rosmarinic Acid RAS medium pass
Potra000599g04558.1 Rosmarinic Acid RAS medium pass
Potra000625g04752.1 Rosmarinic Acid RAS low borderline
Potra000747g05887.1 Rosmarinic Acid RAS low borderline
Potra000747g05887.2 Rosmarinic Acid RAS low borderline
Potra000958g07861.1 Rosmarinic Acid RAS low borderline
Potra000958g07861.2 Rosmarinic Acid RAS low borderline
Potra000958g07861.3 Rosmarinic Acid RAS low borderline
Potra000975g08077.1 Rosmarinic Acid RAS low borderline
Potra000975g08077.2 Rosmarinic Acid RAS low borderline
Potra000975g08077.3 Rosmarinic Acid RAS low borderline
Potra001111g09750.1 Rosmarinic Acid RAS low borderline
Potra001111g09750.2 Rosmarinic Acid RAS low borderline
Potra001111g09750.3 Rosmarinic Acid RAS low borderline
Potra001111g09750.4 Rosmarinic Acid RAS low borderline
Potra001253g10789.1 Rosmarinic Acid RAS low borderline
Potra001253g10789.2 Rosmarinic Acid RAS low borderline
Potra001327g11402.1 Rosmarinic Acid RAS low borderline
Potra001361g11641.1 Rosmarinic Acid RAS low borderline
Potra001361g11641.2 Rosmarinic Acid RAS low borderline
Potra001534g12735.1 Rosmarinic Acid RAS medium pass
Potra001534g12735.2 Rosmarinic Acid RAS medium pass