PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Potra187217g28489.1 Rosmarinic Acid C4H low borderline
Potra187320g28496.1 Rosmarinic Acid C4H medium pass
Potra188390g31423.1 Rosmarinic Acid C4H low borderline
Potra189406g28681.1 Rosmarinic Acid C4H medium pass
Potra194782g28983.1 Rosmarinic Acid C4H low borderline
Potra197415g29223.1 Rosmarinic Acid C4H medium pass
Potra197541g34420.1 Rosmarinic Acid C4H low borderline
Potra198289g29301.1 Rosmarinic Acid C4H low borderline
Potra198289g29301.2 Rosmarinic Acid C4H low borderline
Potra198923g29364.1 Rosmarinic Acid C4H medium pass
Potra198923g29364.2 Rosmarinic Acid C4H low borderline
Potra199887g29453.1 Rosmarinic Acid C4H low borderline
Potra200061g30319.1 Rosmarinic Acid C4H low borderline
Potra200545g29519.1 Rosmarinic Acid C4H medium pass
Potra200545g29519.2 Rosmarinic Acid C4H medium pass
Potra200545g29519.3 Rosmarinic Acid C4H medium pass
Potra200545g29519.4 Rosmarinic Acid C4H medium pass
Potra000149g00527.1 Rosmarinic Acid CPR medium pass
Potra000427g02250.1 Rosmarinic Acid CPR medium pass
Potra000615g04674.1 Rosmarinic Acid CPR medium pass
Potra000615g04674.2 Rosmarinic Acid CPR medium pass
Potra000615g04674.3 Rosmarinic Acid CPR medium pass
Potra000615g04674.4 Rosmarinic Acid CPR medium pass
Potra000615g04674.5 Rosmarinic Acid CPR medium pass
Potra000615g04674.6 Rosmarinic Acid CPR medium pass
Potra000615g04674.7 Rosmarinic Acid CPR medium pass
Potra000615g04674.8 Rosmarinic Acid CPR medium pass
Potra000633g04840.1 Rosmarinic Acid CPR low borderline
Potra000633g04840.2 Rosmarinic Acid CPR low borderline
Potra000633g04840.3 Rosmarinic Acid CPR low borderline
Potra000633g04840.4 Rosmarinic Acid CPR low borderline
Potra000633g04840.5 Rosmarinic Acid CPR low borderline
Potra000633g04840.6 Rosmarinic Acid CPR medium pass
Potra000633g04840.7 Rosmarinic Acid CPR medium pass
Potra001011g08421.3 Rosmarinic Acid CPR low borderline
Potra001011g08421.4 Rosmarinic Acid CPR low borderline
Potra001065g09154.1 Rosmarinic Acid CPR medium pass
Potra001065g33852.1 Rosmarinic Acid CPR medium pass
Potra001065g33852.2 Rosmarinic Acid CPR medium pass
Potra001315g11295.1 Rosmarinic Acid CPR low borderline
Potra002111g16399.1 Rosmarinic Acid CPR medium pass
Potra002111g16399.2 Rosmarinic Acid CPR low borderline
Potra002111g16399.3 Rosmarinic Acid CPR medium pass
Potra002111g16399.4 Rosmarinic Acid CPR medium pass
Potra003198g20978.1 Rosmarinic Acid CPR medium pass
Potra003198g20978.2 Rosmarinic Acid CPR medium pass
Potra003198g20978.3 Rosmarinic Acid CPR medium pass
Potra003884g23327.1 Rosmarinic Acid CPR medium pass
Potra003884g23327.2 Rosmarinic Acid CPR medium pass
Potra003884g23327.3 Rosmarinic Acid CPR medium pass