PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Potra004073g24445.2 Rosmarinic Acid C4H low borderline
Potra004252g24734.1 Rosmarinic Acid C4H medium pass
Potra004401g24886.2 Rosmarinic Acid C4H low borderline
Potra004401g24886.3 Rosmarinic Acid C4H low borderline
Potra004401g24886.5 Rosmarinic Acid C4H low borderline
Potra004432g24917.1 Rosmarinic Acid C4H medium pass
Potra004432g24917.2 Rosmarinic Acid C4H medium pass
Potra004998g25245.1 Rosmarinic Acid C4H low borderline
Potra004998g25245.2 Rosmarinic Acid C4H low borderline
Potra005080g25268.1 Rosmarinic Acid C4H low borderline
Potra005271g25339.1 Rosmarinic Acid C4H low borderline
Potra005304g32952.1 Rosmarinic Acid C4H low borderline
Potra005630g25450.1 Rosmarinic Acid C4H low borderline
Potra005767g25483.1 Rosmarinic Acid C4H low borderline
Potra005938g33038.1 Rosmarinic Acid C4H low borderline
Potra006169g25588.1 Rosmarinic Acid C4H low borderline
Potra006311g25650.1 Rosmarinic Acid C4H low borderline
Potra006311g25650.2 Rosmarinic Acid C4H low borderline
Potra006786g25798.1 Rosmarinic Acid C4H low borderline
Potra007587g25997.1 Rosmarinic Acid C4H low borderline
Potra007987g26074.1 Rosmarinic Acid C4H low borderline
Potra007987g26074.2 Rosmarinic Acid C4H low borderline
Potra008300g26135.1 Rosmarinic Acid C4H low borderline
Potra008300g26135.2 Rosmarinic Acid C4H low borderline
Potra008543g26180.1 Rosmarinic Acid C4H low borderline
Potra008732g26223.1 Rosmarinic Acid C4H low borderline
Potra009140g26296.1 Rosmarinic Acid C4H low borderline
Potra009707g26415.1 Rosmarinic Acid C4H low borderline
Potra009968g26457.1 Rosmarinic Acid C4H low borderline
Potra009968g26457.2 Rosmarinic Acid C4H low borderline
Potra009997g26466.1 Rosmarinic Acid C4H low borderline
Potra010159g26509.1 Rosmarinic Acid C4H low borderline
Potra010159g26509.2 Rosmarinic Acid C4H low borderline
Potra155375g35590.1 Rosmarinic Acid C4H low borderline
Potra160297g26851.1 Rosmarinic Acid C4H low borderline
Potra160898g26890.1 Rosmarinic Acid C4H low borderline
Potra162064g26995.1 Rosmarinic Acid C4H medium pass
Potra163031g27057.1 Rosmarinic Acid C4H low borderline
Potra163222g27078.1 Rosmarinic Acid C4H medium pass
Potra163222g27078.2 Rosmarinic Acid C4H medium pass
Potra168341g27363.1 Rosmarinic Acid C4H low borderline
Potra170669g27536.1 Rosmarinic Acid C4H low borderline
Potra170669g27536.2 Rosmarinic Acid C4H low borderline
Potra173180g27633.1 Rosmarinic Acid C4H medium pass
Potra174312g27711.1 Rosmarinic Acid C4H low borderline
Potra177342g27948.1 Rosmarinic Acid C4H low borderline
Potra179359g28012.1 Rosmarinic Acid C4H low borderline
Potra182600g28240.1 Rosmarinic Acid C4H medium pass
Potra182600g28240.2 Rosmarinic Acid C4H medium pass
Potra186200g28419.1 Rosmarinic Acid C4H low borderline