PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Potra001274g11009.1 Flavonoid IFS medium borderline
Potra001274g11009.2 Flavonoid IFS medium borderline
Potra001285g11089.1 Flavonoid IFS medium borderline
Potra001324g11373.1 Flavonoid IFS low borderline
Potra001334g11457.1 Flavonoid IFS low borderline
Potra001357g11626.1 Flavonoid IFS low borderline
Potra001455g12249.1 Flavonoid IFS low borderline
Potra001513g12618.1 Flavonoid IFS low borderline
Potra001513g12618.2 Flavonoid IFS low borderline
Potra001581g13071.1 Flavonoid IFS low borderline
Potra001585g13100.1 Flavonoid IFS medium borderline
Potra001585g13100.2 Flavonoid IFS medium borderline
Potra001585g13101.1 Flavonoid IFS low borderline
Potra001585g13102.1 Flavonoid IFS low borderline
Potra001613g13292.1 Flavonoid IFS low borderline
Potra001613g13292.2 Flavonoid IFS low borderline
Potra001613g13292.3 Flavonoid IFS low borderline
Potra001613g13292.4 Flavonoid IFS low borderline
Potra001645g13492.1 Flavonoid IFS low borderline
Potra001645g13492.2 Flavonoid IFS low borderline
Potra001645g13492.3 Flavonoid IFS low borderline
Potra001645g13492.4 Flavonoid IFS low borderline
Potra001647g13503.1 Flavonoid IFS medium borderline
Potra001762g14330.1 Flavonoid IFS low borderline
Potra001801g14583.1 Flavonoid IFS low borderline
Potra001804g14599.1 Flavonoid IFS medium borderline
Potra001813g14649.1 Flavonoid IFS medium borderline
Potra001876g14979.1 Flavonoid IFS low borderline
Potra001876g14979.2 Flavonoid IFS low borderline
Potra001907g15129.1 Flavonoid IFS medium borderline
Potra001965g15510.1 Flavonoid IFS medium borderline
Potra001965g15510.2 Flavonoid IFS medium borderline
Potra001965g15511.1 Flavonoid IFS medium borderline
Potra001965g15513.1 Flavonoid IFS medium borderline
Potra002011g15767.1 Flavonoid IFS low borderline
Potra002011g15767.2 Flavonoid IFS low borderline
Potra002011g15767.3 Flavonoid IFS low borderline
Potra002011g15767.4 Flavonoid IFS low borderline
Potra002011g15767.5 Flavonoid IFS low borderline
Potra002011g15767.6 Flavonoid IFS low borderline
Potra002021g15846.1 Flavonoid IFS low borderline
Potra002021g15846.2 Flavonoid IFS low borderline
Potra002099g16332.1 Flavonoid IFS medium borderline
Potra002118g16447.1 Flavonoid IFS low borderline
Potra002122g16460.1 Flavonoid IFS medium borderline
Potra002129g16502.1 Flavonoid IFS low borderline
Potra002129g16502.2 Flavonoid IFS low borderline
Potra002139g16572.1 Flavonoid IFS medium borderline
Potra002140g16581.1 Flavonoid IFS medium borderline
Potra002148g16621.1 Flavonoid IFS low borderline