PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Potra002169g16741.6 Flavonoid IFS low borderline
Potra002169g16741.8 Flavonoid IFS low borderline
Potra002334g17841.1 Flavonoid IFS low borderline
Potra002411g18340.1 Flavonoid IFS low borderline
Potra002411g18340.2 Flavonoid IFS low borderline
Potra002411g18340.3 Flavonoid IFS low borderline
Potra002411g18340.4 Flavonoid IFS low borderline
Potra002448g18542.1 Flavonoid IFS medium borderline
Potra002497g18861.3 Flavonoid IFS low borderline
Potra002516g18979.1 Flavonoid IFS low borderline
Potra002537g19112.1 Flavonoid IFS low borderline
Potra002556g19264.1 Flavonoid IFS low borderline
Potra002556g19264.2 Flavonoid IFS low borderline
Potra002642g19640.2 Flavonoid IFS medium borderline
Potra002696g19781.1 Flavonoid IFS medium borderline
Potra002699g19788.1 Flavonoid IFS low borderline
Potra002699g19788.2 Flavonoid IFS low borderline
Potra002699g19788.3 Flavonoid IFS low borderline
Potra002913g20293.2 Flavonoid IFS low borderline
Potra002923g20324.1 Flavonoid IFS low borderline
Potra002923g20324.2 Flavonoid IFS low borderline
Potra002923g20324.3 Flavonoid IFS low borderline
Potra002923g20324.4 Flavonoid IFS low borderline
Potra002923g20324.5 Flavonoid IFS low borderline
Potra002923g20324.6 Flavonoid IFS low borderline
Potra002923g20324.7 Flavonoid IFS low borderline
Potra002923g20324.8 Flavonoid IFS low borderline
Potra002934g20340.1 Flavonoid IFS low borderline
Potra003058g20643.1 Flavonoid IFS medium borderline
Potra003058g20643.2 Flavonoid IFS medium borderline
Potra003101g20744.1 Flavonoid IFS low borderline
Potra003101g20744.2 Flavonoid IFS low borderline
Potra003101g20744.3 Flavonoid IFS low borderline
Potra003101g20744.4 Flavonoid IFS low borderline
Potra003114g20768.1 Flavonoid IFS medium borderline
Potra003179g20912.1 Flavonoid IFS medium borderline
Potra003191g20955.1 Flavonoid IFS low borderline
Potra003191g33678.1 Flavonoid IFS low borderline
Potra003245g21121.1 Flavonoid IFS low borderline
Potra003245g21121.2 Flavonoid IFS low borderline
Potra003245g21121.3 Flavonoid IFS low borderline
Potra003245g21121.4 Flavonoid IFS low borderline
Potra003299g21279.1 Flavonoid IFS medium borderline
Potra003422g32178.1 Flavonoid IFS low borderline
Potra003442g35603.1 Flavonoid IFS low borderline
Potra003450g21702.1 Flavonoid IFS medium borderline
Potra003474g21781.1 Flavonoid IFS low borderline
Potra003518g21879.1 Flavonoid IFS low borderline
Potra003537g21942.1 Flavonoid IFS medium borderline
Potra003537g21942.2 Flavonoid IFS medium borderline