PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Potra000432g02306.4 Terpenoid GGPPS medium borderline
Potra000432g02306.5 Terpenoid GGPPS medium borderline
Potra000432g02306.6 Terpenoid GGPPS medium borderline
Potra000432g02306.7 Terpenoid GGPPS medium borderline
Potra000432g02306.8 Terpenoid GGPPS medium borderline
Potra000627g04781.1 Terpenoid GGPPS medium borderline
Potra000627g04783.1 Terpenoid GGPPS medium borderline
Potra000962g07906.1 Terpenoid GGPPS medium borderline
Potra001108g09703.1 Terpenoid GGPPS medium borderline
Potra002074g16169.1 Terpenoid GGPPS medium borderline
Potra002096g16307.1 Terpenoid GGPPS medium borderline
Potra004732g25171.1 Terpenoid GGPPS medium borderline
Potra005525g25419.1 Terpenoid GGPPS medium borderline
Potra000839g06772.1 Terpenoid HDR/IspH high pass
Potra000839g06772.2 Terpenoid HDR/IspH high pass
Potra000980g08115.1 Terpenoid HDR/IspH high pass
Potra000980g08115.2 Terpenoid HDR/IspH high pass
Potra000980g08115.3 Terpenoid HDR/IspH high pass
Potra000980g08115.4 Terpenoid HDR/IspH high pass
Potra000980g08115.5 Terpenoid HDR/IspH medium pass
Potra001288g11117.1 Terpenoid HDS/IspG medium pass
Potra003962g23786.1 Terpenoid HDS/IspG medium pass
Potra003962g23786.2 Terpenoid HDS/IspG medium pass
Potra001034g08700.1 Terpenoid HMGR medium pass
Potra001034g08700.2 Terpenoid HMGR medium pass
Potra001034g08700.3 Terpenoid HMGR medium pass
Potra001917g15222.1 Terpenoid HMGR medium pass
Potra001917g15222.2 Terpenoid HMGR medium pass
Potra002404g18294.1 Terpenoid HMGR medium pass
Potra002404g18294.2 Terpenoid HMGR medium pass
Potra003721g22562.1 Terpenoid HMGR medium pass
Potra003721g22562.2 Terpenoid HMGR medium pass
Potra004020g24287.1 Terpenoid HMGR medium pass
Potra187595g28519.1 Terpenoid HMGR medium pass
Potra187595g28519.2 Terpenoid HMGR medium pass
Potra187595g28519.3 Terpenoid HMGR medium pass
Potra000416g02099.1 Terpenoid HMGS high pass
Potra000416g02099.2 Terpenoid HMGS high pass
Potra001190g10307.1 Terpenoid HMGS high pass
Potra001190g10307.2 Terpenoid HMGS high pass
Potra005097g25272.1 Terpenoid IDI medium pass
Potra005097g25272.2 Terpenoid IDI medium pass
Potra000008g00040.1 Terpenoid MCT/IspD low borderline
Potra000008g00040.10 Terpenoid MCT/IspD low borderline
Potra000008g00040.16 Terpenoid MCT/IspD low borderline
Potra000008g00040.2 Terpenoid MCT/IspD low borderline
Potra000008g00040.3 Terpenoid MCT/IspD low borderline
Potra000008g00040.4 Terpenoid MCT/IspD low borderline
Potra000008g00040.5 Terpenoid MCT/IspD low borderline
Potra000008g00040.6 Terpenoid MCT/IspD low borderline