PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Potra000008g00040.7 Terpenoid MCT/IspD low borderline
Potra000008g00040.8 Terpenoid MCT/IspD low borderline
Potra000008g00040.9 Terpenoid MCT/IspD low borderline
Potra000404g01930.1 Terpenoid MCT/IspD low borderline
Potra000404g01930.2 Terpenoid MCT/IspD low borderline
Potra001791g14543.1 Terpenoid MCT/IspD high pass
Potra001791g34968.1 Terpenoid MCT/IspD high pass
Potra161712g26958.4 Terpenoid MCT/IspD low borderline
Potra161712g26958.5 Terpenoid MCT/IspD low borderline
Potra002545g19168.1 Terpenoid MDS/IspF high pass
Potra002545g19168.2 Terpenoid MDS/IspF medium pass
Potra002545g19168.3 Terpenoid MDS/IspF medium pass
Potra003229g21073.1 Terpenoid MDS/IspF high pass
Potra003229g21073.2 Terpenoid MDS/IspF high pass
Potra000404g01906.1 Terpenoid MVD low borderline
Potra000404g01906.2 Terpenoid MVD low borderline
Potra000404g01906.3 Terpenoid MVD low borderline
Potra001498g12493.1 Terpenoid MVD low borderline
Potra001498g12493.2 Terpenoid MVD low borderline
Potra001498g12493.3 Terpenoid MVD low borderline
Potra001498g12493.5 Terpenoid MVD low borderline
Potra001498g12493.6 Terpenoid MVD low borderline
Potra001498g12497.1 Terpenoid MVD medium pass
Potra001498g12497.2 Terpenoid MVD medium pass
Potra001498g12497.3 Terpenoid MVD medium pass
Potra001821g14694.1 Terpenoid MVD low borderline
Potra001821g14698.1 Terpenoid MVD medium pass
Potra001821g14698.2 Terpenoid MVD medium pass
Potra001821g14698.3 Terpenoid MVD medium pass
Potra001821g14698.4 Terpenoid MVD medium pass
Potra001821g14698.5 Terpenoid MVD medium pass
Potra003202g20988.1 Terpenoid MVD low borderline
Potra003202g20988.2 Terpenoid MVD low borderline
Potra000995g08256.1 Terpenoid MVK low borderline
Potra000995g08256.2 Terpenoid MVK low borderline
Potra000995g08256.3 Terpenoid MVK low borderline
Potra001034g08716.1 Terpenoid MVK low borderline
Potra001053g09008.1 Terpenoid MVK medium pass
Potra001053g09008.2 Terpenoid MVK medium pass
Potra001053g09008.3 Terpenoid MVK medium pass
Potra001567g12954.1 Terpenoid MVK low borderline
Potra001817g14665.1 Terpenoid MVK low borderline
Potra002361g17996.1 Terpenoid MVK low borderline
Potra002361g17996.2 Terpenoid MVK low borderline
Potra002361g17996.3 Terpenoid MVK low borderline
Potra004022g24308.1 Terpenoid MVK medium pass
Potra004022g24308.2 Terpenoid MVK medium pass
Potra004022g24308.3 Terpenoid MVK medium pass
Potra001086g09422.1 Terpenoid PMK medium pass
Potra000372g01575.1 Terpenoid TPS medium pass