PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Potra001730g14086.1 Steroid CYP90D1 medium borderline
Potra001876g14979.1 Steroid CYP90D1 medium borderline
Potra001876g14979.2 Steroid CYP90D1 medium borderline
Potra002129g16502.2 Steroid CYP90D1 medium borderline
Potra002139g16572.1 Steroid CYP90D1 low borderline
Potra002169g16741.5 Steroid CYP90D1 low borderline
Potra002411g18340.1 Steroid CYP90D1 medium borderline
Potra002411g18340.2 Steroid CYP90D1 medium borderline
Potra002448g18542.1 Steroid CYP90D1 low borderline
Potra002913g20293.1 Steroid CYP90D1 low borderline
Potra003083g20700.1 Steroid CYP90D1 low borderline
Potra003191g20955.1 Steroid CYP90D1 medium borderline
Potra003191g33678.1 Steroid CYP90D1 medium borderline
Potra003231g21077.1 Steroid CYP90D1 low borderline
Potra003231g21077.2 Steroid CYP90D1 low borderline
Potra003231g21077.3 Steroid CYP90D1 low borderline
Potra003245g21121.1 Steroid CYP90D1 medium borderline
Potra003245g21121.2 Steroid CYP90D1 medium borderline
Potra003542g21960.1 Steroid CYP90D1 low borderline
Potra003987g24014.1 Steroid CYP90D1 low borderline
Potra004022g24309.3 Steroid CYP90D1 low borderline
Potra004252g24734.1 Steroid CYP90D1 low borderline
Potra006786g25798.1 Steroid CYP90D1 low borderline
Potra007587g25997.1 Steroid CYP90D1 low borderline
Potra008732g26223.1 Steroid CYP90D1 low borderline
Potra009968g26457.1 Steroid CYP90D1 low borderline
Potra009968g26457.2 Steroid CYP90D1 low borderline
Potra168027g27333.3 Steroid CYP90D1 medium borderline
Potra168027g27333.4 Steroid CYP90D1 medium borderline
Potra170136g27497.1 Steroid CYP90D1 medium borderline
Potra198289g29301.1 Steroid CYP90D1 low borderline
Potra198289g29301.2 Steroid CYP90D1 low borderline
Potra200149g29472.1 Steroid CYP90D1 medium borderline
Potra200149g29472.2 Steroid CYP90D1 medium pass
Potra000649g04980.1 Steroid DET2 low borderline
Potra000649g04980.2 Steroid DET2 medium pass
Potra000649g04981.1 Steroid DET2 medium pass
Potra000702g05484.1 Steroid DET2 low borderline
Potra000830g06658.1 Steroid DET2 low borderline
Potra000830g06659.1 Steroid DET2 low borderline
Potra000830g06659.2 Steroid DET2 medium pass
Potra000985g08139.1 Steroid DET2 low borderline
Potra001027g08606.1 Steroid DET2 low borderline
Potra002095g16303.1 Steroid DET2 medium pass
Potra002284g17497.1 Steroid DET2 low borderline
Potra002284g17497.2 Steroid DET2 low borderline
Potra002284g17497.3 Steroid DET2 low borderline
Potra006606g25732.1 Steroid DET2 medium pass
Potra006606g25732.2 Steroid DET2 medium pass
Potra000302g01093.1 Steroid DWF1 medium pass