PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Potra000302g01093.2 Steroid DWF1 medium pass
Potra000302g01093.3 Steroid DWF1 medium pass
Potra000302g01093.4 Steroid DWF1 medium pass
Potra000302g01093.5 Steroid DWF1 medium pass
Potra000302g01093.6 Steroid DWF1 medium pass
Potra000302g01093.7 Steroid DWF1 medium pass
Potra000302g01093.8 Steroid DWF1 medium pass
Potra185889g28395.1 Steroid DWF1 medium pass
Potra185889g28395.2 Steroid DWF1 medium pass
Potra185889g28395.3 Steroid DWF1 medium pass
Potra000028g00138.1 Steroid DWF4/CYP90B1 low borderline
Potra000093g00315.1 Steroid DWF4/CYP90B1 medium borderline
Potra000138g00478.1 Steroid DWF4/CYP90B1 medium borderline
Potra000148g00519.1 Steroid DWF4/CYP90B1 low borderline
Potra000175g34074.1 Steroid DWF4/CYP90B1 medium borderline
Potra000180g00706.3 Steroid DWF4/CYP90B1 medium borderline
Potra000180g00706.4 Steroid DWF4/CYP90B1 medium borderline
Potra000352g01310.1 Steroid DWF4/CYP90B1 medium borderline
Potra000357g01397.1 Steroid DWF4/CYP90B1 low borderline
Potra000357g01397.2 Steroid DWF4/CYP90B1 low borderline
Potra000370g01540.1 Steroid DWF4/CYP90B1 low borderline
Potra000387g01755.1 Steroid DWF4/CYP90B1 medium borderline
Potra000432g02300.2 Steroid DWF4/CYP90B1 low borderline
Potra000432g02301.1 Steroid DWF4/CYP90B1 low borderline
Potra000432g02301.2 Steroid DWF4/CYP90B1 low borderline
Potra000458g02654.1 Steroid DWF4/CYP90B1 low borderline
Potra000490g03098.1 Steroid DWF4/CYP90B1 low borderline
Potra000490g03098.2 Steroid DWF4/CYP90B1 low borderline
Potra000490g03098.3 Steroid DWF4/CYP90B1 low borderline
Potra000490g03098.4 Steroid DWF4/CYP90B1 low borderline
Potra000490g03098.5 Steroid DWF4/CYP90B1 low borderline
Potra000490g03098.6 Steroid DWF4/CYP90B1 low borderline
Potra000508g03331.2 Steroid DWF4/CYP90B1 low borderline
Potra000633g04834.1 Steroid DWF4/CYP90B1 low borderline
Potra000633g04834.2 Steroid DWF4/CYP90B1 low borderline
Potra000633g04834.3 Steroid DWF4/CYP90B1 low borderline
Potra000662g34587.1 Steroid DWF4/CYP90B1 low borderline
Potra000663g05121.1 Steroid DWF4/CYP90B1 low borderline
Potra000683g05292.1 Steroid DWF4/CYP90B1 medium borderline
Potra000685g05310.1 Steroid DWF4/CYP90B1 low borderline
Potra000686g05324.1 Steroid DWF4/CYP90B1 low borderline
Potra000701g05464.3 Steroid DWF4/CYP90B1 medium borderline
Potra000701g05464.5 Steroid DWF4/CYP90B1 medium borderline
Potra000726g05681.1 Steroid DWF4/CYP90B1 low borderline
Potra000726g05683.1 Steroid DWF4/CYP90B1 low borderline
Potra000726g05683.2 Steroid DWF4/CYP90B1 low borderline
Potra000726g35476.1 Steroid DWF4/CYP90B1 low borderline
Potra000729g05722.1 Steroid DWF4/CYP90B1 low borderline
Potra000729g05723.1 Steroid DWF4/CYP90B1 low borderline
Potra000729g05723.2 Steroid DWF4/CYP90B1 low borderline